Ll_transcript_360307

• Id Trinity: TRINITY_DN47600_c1_g1_i7
• Name Transcript: Ll_transcript_360307
• Sequence: GAAATTAAGAACACAAAATTTGTTGGTACGATGATAATGTTGGAAAATAACAACATAACACGCCCACCTTTCAATTCCAATCCAATATGATGATATAACA TTCTTTCACTCCTCACTCACTCATTTCTCTCATTCACTCACTATTTCTCTCATTCACTCACAACTATCCTATTACCTTTTAGCACTTACCCCAAGAATGA GATATTCTGTAATCCTTGGTTCTTCCATTGTTACTCCTCCAAATCCATCTTCTTCTTCTTCTTCTTCATCTTCATCATCTTCTTCCTCTTCTACTCCTTC TTCTCATAACCGCCACTTCACAAAGCCTCACTATTCTTCTCTTCCAACCCTTTCTCCTTCTCCCTCCAACACCATCTCCCGCACCCTCCAGGTTCCGCTC AACCAACGTCCCAAGCCTCAGCAACAACTTCAGTTTCTGTTCGATGATGTTTCACAGCTTCAGATTCTGGTTCGGAATGTTGTGGCGGGTATCCGAAGCA GGAAGGTTCGGAGTGTTATTGATACTTTGAACAAAGTGTTGAAGGAACAGGAGCAGTTTGGTGGTGGAGGAGGTTCTTTATCTTTGTCTACTCATTTTGA TGCTTCTTCAATGGATATCATTGGGAAGGAATGTGTTTCTATGGTTAAATGTGGTCGAATTCATGAAGCTGTTGAATTCATGGAGGTTCTCTCACGTTTC CAATTATCAGTCAGAAAGCTAGTTCAGCCATCCGACATTATAAAGCAATGTGTTCTTAGTCGTAACCCAAATCTAGCTGTGAGGTATGCTTGTCTTCTCC CACATGCACATATATTGTTCTGCAACATCATATGTGAATTTGGTAAAGGTAGGGATTTAGCATCTGCTCTGAAAGCATATGATGCATCAAAGAAACACTT GAATAGTCCCAACATGTACATATACCGGGCAATAATTGATGCTTGCGGTCTCTGTGGCGATTGTATGAAATCTAGGTACATATATGAGGATTTACTCAAT CAGAAGATCACTCCTAATATATATGTGTTCAACAGTCTCATGAATGTGAATGTCCATGACCTGAGCTACACATTAAAACTACACGAGAATATGCAGAATC TTGGCCTGAAGCCAGATATGACATCTTATAACATCCTGCTGAAAGCATGCTGTGTTGCTGGAAGAGTTGACTTGGCTCAAGACATGTATAGGGAACTTAA ACATTTGGAATCAGTTGGACGGCTGAAATTAGATGTTTTTACCTACAGCACAATTATAAAGGTATTTGCAGATGCAAAAATGTGGCAAACGGCTCTAAAA ATTAAGCAGGATATGCTGTCTGCTGGTGTTTCTCTTAATACTGTTGCATGGTCATCACTAATCAATGCTTGCGCACATGCGGGGCTTGTAGAGCAGTCAA TCCAGTTATTCGAAGAAATGCTTTTGGCTGGCTGTGAACCTAATACACAATGTTTCAATATTATTTTACATGCTTGTGTTGAAGCTTGCCAATATGACAG GGCTTTTCGCTTTTTCCATTCTTGGAAGGGAAATAAGATGTTGGAGTCCTCCGGCGAAGGCTACAAAAGCAATTTTGAGCAGGGAGACATGCATAATGCT ACTAATTTGCCAACTGGCATTTCTAATTCTCACATCTTGAGTTTTGCTAAGAGGTTCCCTTTCAAACCTACTACAACAACATATAATATTCTACTGAAGG CCTGTGGTACTGATTATTACCATGCAAAAGCAATAATCAACGAGATGAAAACAATAGGTCTTTCCCCTAATCACATAAGCTGGTCAATTCTGATTGATAT ATGCGCAGAATCAGAAAATGTCGAGGGTGCTCTCGAGATTTTGAAAACCATGTCTTATGATGGAATTAGAGCCGATGTTGTCACGTATACAACAGCCATT AAGGTTTGTGTGGAAAGTAAGGATTTTAAGCAAGCAATATCATTATATGAAGAAATGAAGAGATTTGAGATACATCCAAATTTGGTGACATATAACACAC TTTTAAAGGCACGCAGTAAATACGGCTCTTTACTTGAGGTGCAGCAATGCCTAGCTATATACCAGGATATGCGGAAAGCAGGGTACAAACCAAATGATTT CTATCTAGAAGGACTAATTGAGGAGTGGTGTGAAGGAGTGATACAAGATAACACATGGGACGAAGGGGAGTTTTCTTCCAGCAACAAATCTGAAATAGAG AGACCTGAGAGTTTACTTCTTGAAAAAATCGCAGTACACCTGCTAAACAGGGTAGCCGACATCCTAACAATTGATGTTCAAGAGCTCACAAAGGTTGAAG CTCGCTTGGTTATTCTTGCAGTTCTGCGAATGATCAAAGAGAACTATGGTTTAGGACATTCAGTGAAGAATGATGACATCTTGATCATCATTGGAGCTAC CAAAGTCAATGAAACTCCAGCTAAACACATATTAGAAGTTGAAGAAGCAATAGTAAAACTTCTGCAGAATGAATTAGGCCTTGAAGTTCTTGCAGGCAGA ACCAGATTTGCACCAAGTGACACAGCAAAGTTAGAGAACAATAAACTTTCAAATCTCAACATAGAGGCAGTACCAAGAGAAAATGCATTACCTACAAGAA TGGGGTTTCACAGAAGGAGTCCTGCAGTTCTACATAAGTTGAAGGTCACTAAAAAATCATTGTACCATTGGTTGCATAGAAAAGTAACTGTTGAATATAG TTTTTGATGATTCCTTTGTTTATAAATTATAAGTAATAGGAATTTTGTACATATTGTAGAAGGCCATTTTTTTGCACCGGCTTGTTCGATCTGTATTTAT GGCATCTAGGTATAACTGCACATGTATCTGTAACCATAGTATGTCATGGAATAAAATCATCA
• Tissue: pods
• Gene name: LI_gene_153947;
• Additional information: details;

Expression of Ll_transcript_360307

FPKM

• PAB: 1.2
• PNAB: 4.1
• PS1: 2.7
• PS2: 1.2
• PS3: 2.3
• PW1: 1.8
• PW2: 3.4
• PW3: 3.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_360307

• Blastp: Pentatricopeptide repeat-containing protein At5g02830, chloroplastic from Arabidopsis with 50.34% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g02830, chloroplastic from Arabidopsis with 54.68% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G02830)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425441.1)
• Pfam: Pentacotripeptide-repeat region of PRORP (PF17177.3)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;