Ll_transcript_360091

• Id Trinity: TRINITY_DN47616_c1_g1_i2
• Name Transcript: Ll_transcript_360091
• Sequence: CCGTTGAGTTCGAGTTCTCCTCACATTTTACTTCACAATGTAATACTTGCTTCTACGAACAAAAAAAAATAATGGGGTCCAAAAGAAGAATACTAGATGA TGAGTAACAAAGGCCACATTAACTAAACGCGAAATAAGGGTATCCTCGCACTGGAGGCAATCCTGTCCGAGCCGGGAACATCCACAGGCTGCACTTTTGG TACCCTTGATAATATAATTCTTTTTCGGATAATTTCCAGCACTTTGCTTAGATCTTGGATTACAAGTCATATTGGATTGAGGCCTAGCCACAAGCCCGTA AATGCTAAACGACTTCTCTTTTGCATTCTAAAACCACTGCTTCTCTTCAAGCATCCTTGGATACTGATATAAGTTTCATGTCTCGGAAAGCATTTTTGGA CTTGTCCTTCCTGCTTCGAAGCTGCACGCCTCATTCCGCTATCTTTCAAGCCAAGCAATGCCATGCCCAAACAATTCTCCAAGGTTTACTTCCCAATGTC ACACTTGAAAATGATCTCTTGCTAGTATACTCTAGATATTCCCTTTGCTGTTATGCTCGCAAAGTATTTGATAGAATGCTTAGAAGAAACATGCATTCAT GGAACATAATGATTGCCTCATGTGTCAAGGATTCCATGTATAATGATGTTTTGACAATTTTTAGTGAGTTAAAGAGACATGGTCTTCAGCCGGATCATTA TACATTACCATCACTGTTTAAGGCTGCTTTAGGAGTATGTGATGCTTGGCTAGGTAAAATATGTCATGGTTGGGTGATAAAGCTTGGGTACGAGGGATAT GTTGTCGTAGGTAGTTCTGTGCTTGAGTTTTATATAAAATGTGGGGATATGCCTCAGGCGCGCTCGGTATTTTCAAATATGTTGTGCAGGGATCATGTGG TGTGGAATTTGATGATTTCAGGGTTTGGAAATGCGGAGTTGTATTCGGAGGCAATCAATTGTTTTAGGGAAATGCTGGTTCTAAATGGGGTGAAGGTGGA TTACATGATTGTTCCGAGCATTTTGAATGCTTGCGGAAGGGAAGGAGACTTGATGAAAGGGAAAGAAGTACATGGTTATGTGGTTAAAAACTTTGCCTTT GATGCAGATGCTCCCATTGGGAATGCATTGATTGATATGTATGGGAAGTGTGGATGCTTGAATGATTCCGAAACGGTTTTCAGGACATTGCGCCACGTGA ATCTGGTCACATGGACCACCATGATATCTTGTTATGGGATACATGGAAAAGGGGAAGAATCACTTTCACTGTTTAAGAAGGCAATAAATGATGGGTTTGC ACCGAACTCTGTCACGGTAACAGCAATCTTAGCCAGTTGCAGCCACACAGGTCTGATAGATCAAGGCAAACACATTTTCAGTTCCATTTACTCTGATTAC GGATTAGAGCCCACCATTGAGCACTACGCATGTATGGTGTATCTTTTGAGCCGCAGCGGATATCTCGTCGAAGCACTCGATTTCTTGAAAAACATGAAAT CACCCGTGACAGGAAGCATTTGGGGTGCCCTTCTTGCTGGTTGTGTAATGCATAAGAATGTTGAAATTGGAGAAATTGCTGCTCATCATCTTTTCCAATT GGAACCAAATAATGCTAGCAACTATATAGCACTTTGTGGTATCTATCAATCTCATGGTATGCTTGATGGCATTTCAAATATTAGAGCCAAAATGAGGAAC TTAGGTTTGGTTAAAACTCCTGGTTATAGTTGGATCAATATTGATGGAAGGGCTCATAAATTCTACCAAGGGGACATTTCTCATCCACTTGCTCAGATGA TTTACAAAATAATCTATCAAATTAGCAATGTTCAGTTATTGAATAACTATTATCTGGGAGTAGAGAATTCTCTGCATGATGATGCTTTGATCATGGGTTT GTAGATCATTACAGGTAATTCATCTGATTTTGTTCTCACTCAAATTGGTGAGAAATTAAACATCTTTCTTTATACGGGACCTGAATTGAAATCCGAAAAT GTGTATCACTCTATGTATTCTTTGATTCTCATTGGTCAGAAAATATAAAGTTTTCTATTGATTCTCAAAATTCATGGGGGGAGACTTGTCTTTCTTTGTT TGAGACATTTCTTTCCCTTTTATCCCAAGTTTCTTTCCCTATTGTAGTGAGCCAG
• Tissue: pods
• Gene name: LI_gene_154071;
• Additional information: details;

Expression of Ll_transcript_360091

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0.8
• PS2: 0
• PS3: 0.3
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_360091

• Blastp: Pentatricopeptide repeat-containing protein At5g04780, mitochondrial from Arabidopsis with 34.49% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g04780, mitochondrial from Arabidopsis with 34.49% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G04780)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418560.1)
• Pfam: PPR repeat family (PF13041.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;