Ll_transcript_360106

• Id Trinity: TRINITY_DN47616_c1_g3_i6
• Name Transcript: Ll_transcript_360106
• Sequence: ACTTGACCTTCCAATGAAGAAAGGTATGAAGATGTTAAAGTACATTACACGGGACAAAGAATTGCGCAGAATTCCTGTCATAAGTAAGCTTTGATTTTTT ATTTGCTAACAAACCAGTAAGACTCTTTAATTTAAGCAAATAATATTCTGCTCCTCATCAATGATTTTGGATATCTTGTTTTGGTAAGTGATGTCCGCAC AAGATGAGGTATCCACTGTTGTTAAATGCTTGAGACTTGGAGCAGCAGACTATCTAGTAAAGCCTTTGCGCACTAATGAACTATTAAATTTGTGGACACA CATGTGGAGAAGGAGGCGCATGCTTGGACTTGTAGAGAAGAACATCTTGAATTATGATTTTGATCTGGTTGCGTCAGACCCTAGTGATGCCAATACGAAC AGTACCACCTTGTTCTCTGATGACACAGATGACAAGTCCAAAAGAAGCACCAATCCAGAGACAGGAATGTCAACCCAACAAGAGCTAGAGGTGAAGCTAA AAAACATTATTTAACTAATGAAAGAATGTTAGTAAGCAATGGGTTCAACAAGCTCTCAAATCAACGAGCTTGTGGACCATGGTAAACTTTGAAATTAATT TAATCTATAAAGAGATGATGTCTTTTTAAATCAATTTTCAGCTGATTTTGTAAATCATCCTACCTTTTAGAATATAAACTTGGTCAATGACACGCTTCCA AGTTTTATAATTGCCTTCCATGTAAAGGTCATATCAGGCGTGATGCTACAATAGAGATTCAATTATAGAACCAATAAATCATTTTTAGTAGAATTTGTTG ATTACTGAGTATCTTAGAAGTTTTTACAGTATCCTTGATGATCCTCTTAGGATTTATTTCCTATTTATATTCCCTATTTTTTATTCAATTAGGACTAAGA TTCTGCTATTCATAATAGGACTATTGGAGTTTGCCTTTTGTTTCCCAACACGTCACTCACATTATTTCCTTAGTTCACAGTTGTCTCTCTTTTTCGTATT AATCACACTTTTTTGAGTCTTCATTCTCTCCTTTTCTCCTTTCTTACCAAAAACCCTCCAATTCAACATGCTATCAGAGTGATACTATCCTCCATCACCT ATACTGTCATCGTTCCACTGTCGAGTTCACAAAAGTTTGGAACTTTGATTAGCCATCTCTTGTAGCGTTGTGTCTCCGACATACTCTGTCTCCTCAGGCA CAAGCACCATCCGATCACTTTCTTGCGAGATATTCAGCCAGCAATTGCACCATCAAACTTGTCTTTTACCAATTTGTCACTTTCAACACCTTGTCGGTTG GCCACATGTCGTCCTTCCTGTCATGCCTACTCGGCACATTTGACGAAATTTCTGCCCTCCATTTGTTGCGCAGAAGTCATCTTTTTCTACTCTACCCAGT CTGTCCTCACCTTGTCCAGTTGCACCAGGTTGTTGTGTTCCCTTGCTCAAAGGGTTTCAAGTGTATTGGGGTTTTTGTTTTTTGCCATTATACTCCCACA GCTGTTTCACCCCCTTGACAGGCACCTTGGCTTTGATTGGAACTATTGGGCTGTTTTTGCCATGTTTAATGCTCAAACCTGCTTTGGCTTCTTAGTTTGG CTCTTCACCAATGCTAGTTCAGCATGGAGGGGGAGAATATTTGTCTGAAATTATTCTTCAATTTTGATATTTATCTCAACTTATTCTTCAATTTTGATAT TTGTCACATCATTCTTTTACCTCTGGTGGATCATAACAATGCCATCTCTTCCCACTAATGATTTTTTTTACCTCCAGCAGTGCTTAAAGGGATGCAATGG GTGTAGATGTGTCATCAGTCATACTTTTTTTCACCAGTTACTGGTGTTTAAGATATGAACACAAATATTGTTATATCACTACTAATAAGTTTAGATCTGA GATGCTATAATCACATTTTATGTGATCTTTTATGTATTTAATTTAACTTTTCAGTCTAATATTGCCATTGCTGCTGCTGTTGTTGAGGAGCCACCAGATG CTCATGCATCAGAGTGTCGGCCTGATGTGCCTAGAATTAGTGATCTCCGAACAGGACATTTTTCATCTGGTCCAAAGAAGAGTGAACTAAAGATTGGGCA GTCATCAGCCTTCTTCACTTATGTTAAAGCATCCGTGTCAAAGAGCAACTTTGAAGGAATTGTTCATGTTGGCAACAATGCTGCTATACGGATGAGGGTC GAAGATGCACACCAACCATGTGCTCAACAGCGGGTTAATGACCTTCAAACACTTGCAAATGGAGAGACCTGTGAAAGTCAATCACAAGATGACTTTCCCA GCAGCAATAGTTTTCCTGATTCTTTCTCTATAGAGAGGTCTTGTACTCCACCTGCGTCTATGGAAGTTTCGCCACAAAATGACCCCAAGGAACAAAATCT GCCTCCAGGTATGGTGCATCCAAGAAATGGAACTCATGGTTCTGAGATTGATGTTTCTACCATGGCTACCCAACATGCTTATCCATATTATATATCTGGA GGTTTTAATCATGTTATGATGCCTTCATCAGCACAAATGTATCAAAAGAATATTCAGGACATGCAGAATCATGCTTGTTCAGCTATGATTGCTCAATATA ATCGTCTTCCTCAAGGTCCTCCTCATGCAATGGGGATGACGTCCTACCCATATTACCCGATGAATCCATACTTACAACCTGGTCAGATTCCTACATCTCA TCCATGGCCATCTTTTGGAGGTTCAAGCTCATCTGAAGTAAAATTAAGTATAGGTGATAGGAGAGAAGCAGCATTGCTGAAGTTTAGACAGAAAAGGAAA GAGCGTTGCTTTGATAAGAAAATCAGATATGTTAATCGGAAACGACTTGCTGAGCGTCGGCCTCGTGTGAAGGGACAGTTTGTCAGAAAGTTAAATGGCA CTAATGTGGATCTTAATGGACAGCCTGCTTCCATCGACTATGACGAAAATGTTGACGAGGAAGATGACCAGGGAGCAAGAGATTCCTCTCCCGAGGACAC TTGAGCATGTCAAAGGACACAATTTAGGTATTGTTTCTTTGGGTGCTTGTGGCGCTTATCTCCAACATAACTATAATGAGTGGTTTATATTTTCACATAT GAGCTATACTACCCATGCTATATTCTTAATTGAAAATAACACCACAAGCACCTAGAAAACGTTATGATGACAATGGAGCCGTATGTCCCAAATTTTGTAC TACTCCATGTACTCAATGTTTTTCATTGGTTGAAAAATAAATCATGAATTAAATATATATTAACTTTATATTTTCTGACCAATAAAAATGAAGGGGTATA TGAAGTGATATAAATTTTGGGACATAAGATGTGTTCCCGATAACAAAAGGATGAAGTGGCACTAGATTCCTTCCTCCACTAATATCTGCCTATCAAGGAT ATGCTTCTGTCCCTTGCTTTAATTGAAACTTGTTGCCTTAGCATTAGTTGATGAGAGCATGCATCCTCATTATTTGGACTTAAAACAATTTCTTGCCCAG TCACTTTATGACTTAGTCAAATGATCCTTGTTAATGAGCTCCTTTAGAAGAAATCGTTCTGATTATGCCCAAAGCGGTTGAAAGTATCACTGTTTTATTG AAACTTTTAGAAGCTGTGCATGCATATGTTTATGGAGAAAAGGCAAGATACCTTGAATTTGTCCTGAGAAATGGGTTATTATTATTCTGAGATTTTAACA TCAAACAAAATTTCACTAAAAA
• Tissue: pods
• Gene name: LI_gene_154073;
• Additional information: details;

Expression of Ll_transcript_360106

FPKM

• PAB: 1
• PNAB: 0.6
• PS1: 0.6
• PS2: 0.6
• PS3: 0.6
• PW1: 0
• PW2: 0.8
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_360106

• Blastp: Two-component response regulator-like APRR1 from Arabidopsis with 48.95% of identity
• Blastx: Two-component response regulator-like APRR1 from Arabidopsis with 37.56% of identity
• Eggnog: Transcription factor(COG5641)
• Kegg: Link to kegg annotations (AT5G61380)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417277.1)
• Pfam: CCT motif (PF06203.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;