Ll_transcript_360112

• Id Trinity: TRINITY_DN47616_c1_g3_i9
• Name Transcript: Ll_transcript_360112
• Sequence: CTCTATCTCTACCCAACTATCTAGACACCCACTATCTTTCTCTTTTTCTATTGCACTTTTTTCTCTCTCTTGCCCTTTACTTACCACGTCCATCTTTCCT CTATCGGAGGCTCTATGCGCATAGCGCACCCATACATCACAATATGCTTCCCAACTCACGCTTACACCTTCTTCCCTTACCCGGTGCACGTTAGTACCCA TCACTATCCCAATTAAGTAATTGCAACTTACCCAGCTAAAAGCTGAGGTTACAAATACTTAACCTCGCCGATTCCCGTGACTGAAAAAAATGATCAAATC CTTTCTTGGAAGGCACTGCTAACGTGCGCTATCATCTAAACGCAGTCGTTTAATGATCTCTTCGTATCGTTCATCGTTTTTTGCTATGGAGAGCAACGTG AATTGAACAAAGGGTTTAATCGGTTTTGAATTCGGTGAAGCAACAATCGTTTTCCTAATTGAGATTGTGGAAACACATATTCTATAGAAGTTCTATAGTG TTACGGTTTTTTTAGGTTTTGGTTTATTATTTTTTCTCTTAGAGTGAGTAAAATGGATCCTGAGGAGGTTAATTTGAATAGAGAAAATGGAAAAAGTAGT GATGGATTCGTTGATAGAAGTAAAGTAAGGATTTTATTGTGTGACAACGATTCCAAAAGTTCACAAGAGGTTTTTACTCTTCTTCTCGGATGTTCTTATC AGGTTACTGCCGTAAGGTCAGCTAGGCAGGTAATTGATGCACTGAATGCAGAGGGGCAACATATAGATATCATACTTGCTGAACTTGACCTTCCAATGAA GAAAGGTATGAAGATGTTAAAGTACATTACACGGGACAAAGAATTGCGCAGAATTCCTGTCATAATGATGTCCGCACAAGATGAGGTATCCACTGTTGTT AAATGCTTGAGACTTGGAGCAGCAGACTATCTAGTAAAGCCTTTGCGCACTAATGAACTATTAAATTTGTGGACACACATGTGGAGAAGGAGGCGCATGC TTGGACTTGTAGAGAAGAACATCTTGAATTATGATTTTGATCTGGTTGCGTCAGACCCTAGTGATGCCAATACGAACAGTACCACCTTGTTCTCTGATGA CACAGATGACAAGTCCAAAAGAAGCACCAATCCAGAGACAGGAATGTCAACCCAACAAGAGCTAGAGTCTAATATTGCCATTGCTGCTGCTGTTGTTGAG GAGCCACCAGATGCTCATGCATCAGAGTGTCGGCCTGATGTGCCTAGAATTAGTGATCTCCGAACAGGACATTTTTCATCTGGTCCAAAGAAGAGTGAAC TAAAGATTGGGCAGTCATCAGCCTTCTTCACTTATGTTAAAGCATCCGTGTCAAAGAGCAACTTTGAAGGAATTGTTCATGTTGGCAACAATGCTGCTAT ACGGATGAGGGTCGAAGATGCACACCAACCATGTGCTCAACAGCGGGTTAATGACCTTCAAACACTTGCAAATGGAGAGACCTGTGAAAGTCAATCACAA GATGACTTTCCCAGCAGCAATAGTTTTCCTGATTCTTTCTCTATAGAGAGGTCTTGTACTCCACCTGCGTCTATGGAAGTTTCGCCACAAAATGACCCCA AGGAACAAAATCTGCCTCCAGGTATGGTGCATCCAAGAAATGGAACTCATGGTTCTGAGATTGATGTTTCTACCATGGCTACCCAACATGCTTATCCATA TTATATATCTGGAGGTTTTAATCATGTTATGATGCCTTCATCAGCACAAATGTATCAAAAGAATATTCAGGACATGCAGAATCATGCTTGTTCAGCTATG ATTGCTCAATATAATCGTCTTCCTCAAGGTCCTCCTCATGCAATGGGGATGACGTCCTACCCATATTACCCGATGAATCCATACTTACAACCTGGTCAGA TTCCTACATCTCATCCATGGCCATCTTTTGGAGGTTCAAGCTCATCTGAAGTAAAATTAAGTATAGGTGATAGGAGAGAAGCAGCATTGCTGAAGTTTAG ACAGAAAAGGAAAGAGCGTTGCTTTGATAAGAAAATCAGATATGTTAATCGGAAACGACTTGCTGAGCGTCGGCCTCGTGTGAAGGGACAGTTTGTCAGA AAGTTAAATGGCACTAATGTGGATCTTAATGGACAGCCTGCTTCCATCGACTATGACGAAAATGTTGACGAGGAAGATGACCAGGGAGCAAGAGATTCCT CTCCCGAGGACACTTGAGCATGTCAAAGGACACAATTTAGGTATTGTTTCTTTGGGTGCTTGTGGCGCTTATCTCCAACATAACTATAATGAGTGGTTTA TATTTTCACATATGAGCTATACTACCCATGCTATATTCTTAATTGAAAATAACACCACAAGCACCTAGAAAACGTTATGATGACAATGGAGCCGTATGTC CCAAATTTTGTACTACTCCATGTACTCAATGTTTTTCATTGGTTGAAAAATAAATCATGAATTAAATATATATTAACTTTATATTTTCTGACCAATAAAA ATGAAGGGGTATATGAAGTGATATAAATTTTGGGACATAAGATGTGTTCCCGATAACAAAAGGATGAAGTGGCACTAGATTCCTTCCTCCACTAATATCT GCCTATCAAGGATATGCTTCTGTCCCTTGCTTTAATTGAAACTTGTTGCCTTAGCATTAGTTGATGAGAGCATGCATCCTCATTATTTGGACTTAAAACA ATTTCTTGCCCAGTCACTTTATGACTTAGTCAAATGATCCTTGTTAATGAGCTCCTTTAGAAGAAATCGTTCTGATTATGCCCAAAGCGGTTGAAAGTAT CACTGTTTTATTGAAACTTTTAGAAGCTGTGCATGCATATGTTTATGGAGAAAAGGCAAGATACCTTGAATTTGTCCTGAGAAATGGGTTATTATTATTC TGAGATTTTAACATCAAACAAAATTTCACTAAAAA
• Tissue: pods
• Gene name: LI_gene_154073;
• Additional information: details;

Expression of Ll_transcript_360112

FPKM

• PAB: 6.8
• PNAB: 6.9
• PS1: 8
• PS2: 5.9
• PS3: 8
• PW1: 7.2
• PW2: 8.2
• PW3: 9.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_360112

• Blastp: Two-component response regulator-like APRR1 from Arabidopsis with 50.64% of identity
• Blastx: Two-component response regulator-like APRR1 from Arabidopsis with 49.18% of identity
• Eggnog: Transcription factor(COG5641)
• Kegg: Link to kegg annotations (AT5G61380)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417277.1)
• Pfam: Response regulator receiver domain (PF00072.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;