| Id Trinity | TRINITY_DN47620_c0_g5_i3 |
|---|---|
| Name Transcript | Ll_transcript_361116 |
| Sequence | GGCGTTACCAGAAGTCTACTGAGTTGCTGATCCGCAAGCTGCCTTTCCAGCGACTTGTTCGTGAAATTGCTCAGGACTTCAAAACTGACCTTCGTTTCCA GAGTGCTGCTATTGGTGCTCTTCAGGAAGCCAGTGAGGCTTACTTGGTCGGCTTGTTTGAAGACACCAACTTGTGTGCCATTCACGCCAAGCGTGTAACC ATCATGCCGAAAGACATCCAGTTGGCGCGGCGAATTCGTGGTGAACGTGCTTAAGTTACTGGCAGCTTTTTTTTAATTTGGTTTTATATCACCTTTTGGG ATGATAATTGTCGACAGTGGGTGACAACTCCCAGGACTCTGTCTTCTTAGCTAAATCAGACAACTACTTTCACTGCCAGGGAGTTGAGATGGAGAATGTC GAGGATTAATGATGTTTGGTTTTTAAGACTGGATTCAATTCTTACCTTTCAGTGTGTATTGTAGTGTGTGTTCAGTTTTAAGTGCTTCTTTGTCACCTTT AACTGAGGCCAATACATTTATTGTGCTTTGCCCATGAAATTTTTCATTTTTGACATGTTTAAACTAAACAAACCTGGTTTCTTATCTGAAGTCCATGATT GGCATTGAGACTTACAAGCAATTTAACTCGTGGGCTAGTGTGCACATGATAAATTTATTTGCTGTAGATGTTGCACTTATTTCCATTTCGGGCAAAGGGC CGTATAATTTGCATGTTTAGCTGATAGAACAATTTGATCTTTCTTATCGTATCCTTTTATTGTTATAAGTTCTGTCAAACATTTTGTATAGAAATGTTAG TGGTGCATTACACATGTTGCTCTGATGCGAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_154100; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_361116
| Blastp | - |
|---|---|
| Blastx | Histone H3.3 from Silurana with 100% of identity |
| Eggnog | Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling(COG2036) |
| Kegg | Link to kegg annotations (100038101) |
| CantataDB | Link to cantataDB annotations (CNT0000247) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435472.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |