Ll_transcript_359308

• Id Trinity: TRINITY_DN47623_c1_g1_i1
• Name Transcript: Ll_transcript_359308
• Sequence: GATGTTCCCGGCTCGGACATGATTGCCTCCGGTGCGAGTATACATGTGAGAAACAAAAAAAAAAAGATGATTTAATCCTACGAGTCATAACATATATCTG ACTAGCCTTTCAATGGGGAAAATTATTTAGACATTTATTTATTTATTTGAGTATAATATCTATAAACTATCAGTATCCATCATTCATTTATATTACTTTT CTTTTGAGATACAATGAAAACACAAAACTCATTATCAATACATGCATTTTCTCTTCTAATTTTGTTGTTGAAATGTTAGTTTTTTATATATATTTAGCAA TGAATTATATATGATGATGGTATCAAATCTCTTAAATACTTGATATCAAAATTACATTAATTGATTTGAATTATATCCTACCTTGTCCCCCATATATATT TTTGACACCTATTTGATAAATATTAATAATCTAAAACATAGAAAAGAATTATGATGGTATACTAGCATTTCTCAGCATTCATTCAGACAGCTACAGGTTA AAAATTTCCTCAACCTTGAAATAGGAAAAATGGAATAAATAGTGTCTGTCTACTCAACTATACAACCATCTAAACCTAATCCTCGTCGTAACCTGCGTTG TCCATGTCAACATCGCCTTCATCGTTGTCGTCGGCTGGTGCTTCATCGGCATCTGCCGTGGCATTGTCGACTGGCCATTCAGTCCCTTCACGATCGGGTC CTGTCACCTTCGATGGCTCATCCTTCTTCGCTTGCATTGATTTCAGACTTTCATCGCTGAAGAACGACGAATATGGTTGGGAAACCTGCATATACAAATT GTTATTAGGCTTCAGCTTCTAGTATAAATATTGGCCCAAATGCTTAGGAATGAATGATTTATAGATTCAGGTTGTTTAATAATTAAATATTGGGTGTACA TTGTAAAGAATAGAAAATAGCAACATTAAAGATACAGATTTTGATAAACTAGGCTAAACCTGAAATTCTCTTTACATGGATAAAATTTCATTGCATTGCT AAATGTTCATAGCTGAACCAACAAGGCATTGGTCCAGTGATATAAGATCCTACTAGATCCTCACAAAGACCAAAATAGTCAAGGGTTCGATTCCTAGGAA CGGCAGTTGTTGGGAGGGAGAGTCACGCATCCCGAAAGATATTAGTTCTTACCCATAAGGTAAGAGGATACCCTTGGTATTACCAGAAAAAAATGTTCAT AGCTAATATATAAATGAGTGTTTAGAGCATTTACTTTGAATAAACATTCCCTCTCCACAGCACTTTCCACAAGCTTGTTCCATTGTTCATTCCTCCTCAA TGTTGAGGCAGATCCAACCACCTATAGAAACAATTAAAATGGAGCACATTAAGGCAAATGTACCAAATGAAATTGTTGAAAGGCTTCACCTTAACCCCAC ATGATACAGTACCAACACTGCAGATTTTGCTCTAGTGATCCCAACATTCATTCGTCGGATGTCCTTCACGAATCCTATACCGTCGTTTTTATCTTTGCTT GCTTCGCTTGCCCTGACACATGAAAATATTGCAACGTCCTTTTCTCGTCCCTGGAAGAAAGGAGAGTATTCCCGTAGTTAATGATGCCAGCCATGCAAGA AGTATATGTGGCATGCTTTTTCCTAGGGTTTTAGCTAAAACTTCCTAGGTAATATTACATTGAGATATAGTATATAGTAGTCAGCTATGTTGAAGATAAA GGTTTTTGATGAGTTCAAAAAGAATGGAAGCAAAACAGATGAAAACGTGGAAGTATTGAAAAGAGAAGGCCACTTGCATGCTGAATGGTGTATACCATGG TAGAAAATCCATCAAAGTATTCACAACCAGTGATTTAAAACCTTCTATCTCGCGGCTAAACGGAGAAAAAGCCATGAATCTAACGATTAATGCATTATGC TGGGGTTCAGATGATCCGATTTTAGAATTATATTCAAGTATTTGCCTTATTATTAACAATTAGATAAATACTAGAAGCAAATGAAAAAGAAAATAGCATG ATCAATATTAGGCTAGTTTACCTGGCAACCATCAACAGTACATATGTCCACTACTTTCTCCGGTGACACTCCAAAAGTCTCCTCAAAACGTTTTTCGAAG AGCTTGACTTGTTGCTTATAAGGTGATATGATTGCAACTTGGTTACCTGACTTTAGTGTGGGATAGAGTGTTACCAGTTTTTGATATAAGAATAGGACAA AATCAACTTCCTCATTATTTATCCATGAACCACTCCCAGATGGCTTAGTCTCTTTTCCCTCGTGTATGTCGAAGAAGCAAAATGGGCCAAAGCAGCGGTA TCTGTCAGAATATATCGTTAGAATGTGATAAATGAGCTCCGCTTCACCTGCTTGTTTTAACATAGGGATTAGTTTTTCTGCTATAGTTACGTTATAGTTA CATTTTTGTAATTGTTATAGTTAATTTTACTGATTCTGTTAGTACTAGGTAGTTACAGTTAGCTACTAACATATTCTGTTCAGTGTATCTAAAAATATCC ATGTAATTGTAATTTTCAGA
• Tissue: pods
• Gene name: LI_gene_154134;
• Additional information: -

Expression of Ll_transcript_359308

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.4
• PS2: 0.3
• PS3: 0.8
• PW1: 0.2
• PW2: 0.6
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_359308

• Blastp: Probable helicase MAGATAMA 3 from Arabidopsis with 65.26% of identity
• Blastx: Probable helicase MAGATAMA 3 from Arabidopsis with 65.26% of identity
• Eggnog: Helicase(COG1112)
• Kegg: Link to kegg annotations (AT4G15570)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441044.1)
• Pfam: AAA domain (PF13087.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;