Id Trinity | TRINITY_DN47632_c3_g3_i2 |
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Name Transcript | Ll_transcript_359521 |
Sequence | CTAAAACCTTCTCTAAACTTGTAACAAAAAAACCATCCAAAACTATCACTTGTTGCTATACTACAACCCTCTTAGACTAATCCCTTTCAAAACCTTCTTC AACAAGGGTCAAGGCCAAAGAAAAAAGAACCCAACTTTCCCTTTTTTTCTCTCTACATGGCTTCTTCTTCTATGACAATTTCCCCAAGAAAACTCCATTC TGATTTGTATTCCTATTCCTACCAAGAAAACTCTAGCACCCCTTTAGTAATAAATGTTCTAGCTTCACTTATTGAGAGAACCATGGCCAGAACAAAGAGA ATTGTTAAGAATGGTTCTTGGTCTTTGTCTAAGGCTATTAGCACTAACATCTTTGATTGTAGTGAGATTCCAGACATGACAATTCAATCTTATCTAGAGA GGATTTTCAGGTACACTAGAGCAGGACCATCAGTGTTTGTTGTGGCCTATGTTTATATTGACAGGTTTTGTCAGAACAATCCTGGATTCAGAATCAATGC TAGAAATGTGCATAGGCTTCTCATTACAACTATTATGGTGGCTTCTAAGTATGTGGAAGACATGTGAGTTTTCCTCTCCTTCTTTGTTTCTATGAGGTGT TTTAAACTGCTGCCGTTGCGATGCGGATTGCAGGTCACATTATGATTCAGTATCACACCACAATTACGGTATGATGCGGTTGTGTTGACCATAACAACTG CAATATTGCAGCCTCATCTTATGATGCGGTCCGCAATTTGAATCGATGTTTCTATCTTTACATTCTTTGCAGAATGCTTACAGTTTAGACTTTACATACA TCATACCTGCATTTAATTGTTACTGCTTTTTTGTTTTGTTAGAAATCTTAATCTTAGTTATGCAATATTGGAAAGTATAGCGTTTGAATCAACATAGAAC AGTAATGAATCGATATTATTACATTTCAAGGAAAAACTAAAGATTTCACATAATATTTTTGATCGAAAAATCAATCTGGCTTATTTCCTACCTTTCGCTA AATAAGAAAACAGATCAGATTCGATACAATCAAACCCGAGAGACTTAGGAATGAAGGAAGAAAATGAAAGGCATTTCATCATATTTCACTATATTTAATA TGTTAGATAAGTGGTGTTTTTAGGTCTTCAATAAAAATTTAATTTTTATTAATTTCTGACTTTAGGGCACTGTTAATATGAACTCTTATGATAAAATTTA TAGCTGATTTCTTGAAATCATAAAGAATTTGGTAAAGGGGTTTGTTAAATTGAGTGAAAGTTTGTTTATGTAGATCTCAAACATTGACATTTGACACTAC TTGCTAACAGTTGAAGAAAGTGACATTTTTCTTAAACCACCAATAATTTAGTCCATGATGATGTTCATGTCTGATAATATGTCAATTTCTCAACTGCACA ATTTGCTTGCATTGAAGTTCAGGACATTATGATTTAACAAAAGAGAAATTTCACATTTTTTTGTTTGACAGGAACTATAAAAATTCATACTTTGGAAGAG TTGGTGGGTTAACAACTAATGAACTGAACAAGTTGGAAGTGGAATTTCTTTTCATGATGGGTTTCAAATTGCATGTGAATTTGAGTGTTTTTGATAGCTA TTGCTGCCATTTAGAGAGGGAAGTTAGCATTGGAGGAGGATACCATATTGAGAGAGCCCTTAGGTGTGCCCAAGAAATCAAAGCAAAGCATGGAGAAGAT ATGGGTTACACACAAATTTCTCGTGTAATGTTGTAGTCTGGTTCCGTGTTTTAAATTGTATCCCACAATTGCAACTGCAATATTACGATTTCAAGAATGA CTGTAATATTGTGGTTTAAAGAGTGAATGCAATATTGTAGTTTGAAGAGTCTCTGTAACAGTCGGAATTATGGCCATATATGCCGTAATTTTTCGCAATT GCGGTAAACATAAAACCGCAACTTAGAACGCAGGTAAAGTTAGTTTTATATGTATAGATCAGTGTAAATCTAAATGTTTGTTGAATCATTCACAGCCATA TAACATTTATAAGTGCCCAAACAATGTGCATAAATAATATAGGGATCATTGT BLAST |
Tissue | pods |
Gene name | LI_gene_154197; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_359521
Blastp | Cyclin-U2-2 from Arabidopsis with 73.88% of identity |
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Blastx | Cyclin-U2-2 from Arabidopsis with 70.14% of identity |
Eggnog | Cyclin-dependent protein kinase(ENOG4111TTK) |
Kegg | Link to kegg annotations (AT3G60550) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019464999.1) |
Pfam | Cyclin (PF08613.10) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |