Id Trinity | TRINITY_DN47644_c4_g6_i4 |
---|---|
Name Transcript | Ll_transcript_360620 |
Sequence | ACCAAATAGAGATGAATATTATGAATGTATTAAAATGATGATAGATAAGAGAATAATAATTGCTTAACGAGTAAGAAAGTTTTGTGTATAAATAAATTAA GCTTATTCTTCCTTTGATTCAACGCTTATTCTTGTCTTCTCTGTTGAGATGGCTAATTCTGAAGCGCATGATGTTCAATCCATTCTCTCTTCTCCAAACA GAGACTTTCTCATTCGTAACAACAATGATCAAGTACCTTTCTTTTTCTTTTTCTTTTTCTTTTTTCTTTTAAATTGCTAAAGTTACTTCTTTTATTACTT ATTTTGCTATCCAATATCTTCATCTATCATTATACATTTCATTCATTGCTATGCTTTTTCTGTTCATAACTTTCACCTCACTGTCCAACTTCTAACTCAT CAATTTATCTTTATGGCCTATGTAACTAACAATCTGGACTCGGAAAGAGTGATTTTTGGGTTAATTTCAGGGCCTCTTTGTTTTAGATTTTTTAACCCAA GAAAGTGATTATTTTGAAAGGAGAAGTAGATGAAATTTAGCTTTTTTGCCAAGTTGTATTATTCAGAATCTCAAGAAATCACTTTTACCCAAATTACTTT TGTAGAATCACTTTTTTTGTAGAATCTGAAAACAAGTATAGCATGAGTTCTTTGTCTGTGGGGAGAGTGCGGAGACAGAAAGATAGTTGTCACTGGCAAT TAGGGTAAATGGGGATCTTTTTATTTGAAAGACTCATTGATCATTCCATTCCATTTTTTATCATAGGAAATATAGTAAAAGATCGGTGATTCGTGCATTT CATAAAACCTTTCATTCAAATCTAAAGTCGATTCGAATAATCGGTGAACAAAGTTTGGCTATGGTTGAATGTTCTGTTTTATTGGTTATTGCAGCTCATA TTAATTGTTTCAAGTGGTAGCTTCATTGAATGAAGTAGCATATGTATACTCGTGTTGTTGGAAATTTGTGGTGTTATTTCTTATATTCTGAATTTTACAG GTTAAAATTGACAGCTTGAAGGGAAAGAAAGTCGGTATATATTTTTCGGCATCTTGGTGTGGTCCGTGCCGAAAATTCACCCCCTTTTTGGTGGATGTGT ACAATGAACTTGCTCCAAAAGGTGACTTTGAGATCATTTTTGTCACAGCTGATGAAGATGACGAGTCCTTTAAGGCGTACTTCTCCAAGATGCCATGGCT TGCGATCCCATTTTCTGATTCAGATACGCGCAACAGCCTTGATGAATTGTTTCAGGTGAAGGGAATTCCCCATCTTGTATTACTTGGTGAAACTGGGGAA GTGTTAACTGATGATGGAACTGGAGTTATTCGTGAATATGGAGTTGAAGGATACCCGTTCACATCAGCGAGGATCCAAGAGTTGGAAGATCAAGAAGCGG AAGCTAAGAGGAACCAGACCTTGACATCTATCTTGACCTCCCCCTCCCGTGACTTTTTGATATCTTCTGATGGAGAGAAAGTAAGCTAGTAACATCGCTC TATTTGTACGAGATATTACTCCACTTTAGTTAATGTCTGGTAGTTTACCAAAACATATTATTCCTTCCCAAATCTGAGTTTTCCTTTTATGTACGTGCAG GTACTTGTCTCCGAGCTCGAGGGCAAGACAGTTGGTCTGTATTTCACATTGACTTCAGACAAAGAATTCGGTGACTTTACTCAACAGCTTGTAGGAGTTT ATGAGAAGCTGAAGGAAAATGGAGAGAAGTTTGAGGTTGTGGTGATACCCCTAGATATTGAGGAAGAATCATTCAAGGAAGGGTTACAATCTATGCCTTG GCTATCTTTGCCTTTCCAGGACAAGAGCCGTGAGAAGCTGATTCGGTACTTCGAGCTCTTAGCCCTCCCCACTTTGGTTATTATTGGGCCAGATGGGAAA ACTCTTCATTCTAATGTTGCTGAGGCTATTGAGGAACATGGGATTGCTGCATACCCTTTCACTCCTGAAAAGTTTGCTGAACTCGTCGAGTTAGAGAAGG CCAAGGAGGCATCTCAAACTCTTGAGTCAATTTTGGTGTCCGGAGACCTAGATTTTGTCATTGGGAAAGATGGGGTGAAGATTCCGGTTTCCGAATTGGT GGGGAAGAACATCCTCCTCTACTTCTCGGCTCACTGGTGTCCTCCATGCCGTGCATTCCTTCCAAAACTCACTGAAGTATATCATAAGATTAAGGCAAAG GACAGTGCATTTGAACTCATTTTCATCTCAAGTGACAATGATCAAGAGTCCTTTGATGGATACTATGCAGAAATGCCATGGTTGGCACTTCCATTCGGTG ACTCAAGGAAGGCATTCCTGAGTCGCAAATTCAAGGTGACTAGCATTCCTTGGCTCGTGGCCATTGGATCAAATGGCATTACTGTCACGAAAGAAGCTCG AGGTCTGGTTGCGCTTCATGGGGCAGATGCTTATCCTTTCACCGATGAGAGAATAAAAGAAATAGAGGCAGAATATGAAGATGCTGCAAAGGGGTGGCCT GAGAAGGTGACGCATGAAGCACATGAGCACGAGCTTTTGTTGACTCTCCGTCCGAACTATTGTTGTGATGGTTGTGATATTGAGGGGGATATACGGTCAT ACTACTGTGATGAGTGTGACTTTGATCTCCATCCAAAATGTGCACTGGAAGAGAAGGGAAACAAAGATGATGCTAAGGAAGATGAGAAGTCCAAAGATGG ATGGGTTTGTGATGGTGATGTCTGTGTTAAAGCCTGAAATCTGATGGTTATATATTGATAATTGATGTTATTAAGCATATTATCTGCATGTGATGCCAGT CATAGCCTTTTCTACTATGTCTTGTATGATGTGAACTATGTAGAAATATTGGATGTGTGATTTGATATGAGTGGTGAACTTTGAATATTTGATGTTTGAT ATTACTGGTGATCTTGAATTTATGGTGAACATGGGTTACCAGGTCAAAAGATGATGATAAGTGACATGAATAAATCATTTATGCTTCGGATTTTAAATTA TTTTTTAATAAAACAATTTTAATAGTTAACAAAATCTCTTCTTTT BLAST |
Tissue | pods |
Gene name | LI_gene_154305; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_360620
Blastp | Probable nucleoredoxin 1 from Arabidopsis with 65.1% of identity |
---|---|
Blastx | Probable nucleoredoxin 1 from Arabidopsis with 58.39% of identity |
Eggnog | nucleoredoxin-like(ENOG410ZIWC) |
Kegg | Link to kegg annotations (AT1G60420) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423440.1) |
Pfam | Thioredoxin-like (PF13905.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |