| Id Trinity | TRINITY_DN47651_c4_g2_i12 |
|---|---|
| Name Transcript | Ll_transcript_359620 |
| Sequence | ATTTGCTTAATGAGATATTTGAAGGATCTACCAATTATAGTTTTTAAAATTATTCTTTGCAAAGAGGGCACAACAAAATCAAAACCAAAAACTAACGATA GAGAGAAATTGAAGACGAGGGTTTCTCTACACTCCTAATCACCCTGATTCATGATGTCAAAGAAGTGCTAGGGAATTTATTTGGTGCATCGGTAAAGTGA TGCATATGGCAGGACTCGTGACTGGGGAGTCATCACATCAGGGTGCAGCTGATGACAACTCATGTGCAAGTTCTAAAGACAAACAAGGTGAAGCATTAGG ACCGTGGTATATGTCTAGGAAAGAAATAGTGGAGAATTCTCCATCAAGAAAAGATGGTATTGACTGGAAGAAAGAGACATATTACCGCAAGTCATACTGC ACATTCTTACAGGACTTAGGAATAAGACTTAAAGTGTGAGTTTGCTGCTACTGATGTTATCATGCATGTTTCCGCATTAATTTCAAGGATTTACTGTATT TTTGGGATTTCTATGAGGATTAAAACAAATGACTAATTTTCTGACATGTATGCCTCAGTGCTCTGTCCAAAGATGTTTATCATGTGAGATCTGGTTCATG AAAAGTAGGTTACTTATTCTTGCACTGTAAGCAAATGATTTTCTTCAGAACTATCTATTCTGGGTTCTTGGTAGGTGGTACTCAGTTTTTCTTGTGATTT CAACAGAGTTTTCATTTGTTTGTTATAATGTTTTTGGTCAAACCAAGGAGGCTAAATATTATGTCCAAACCCTTTGATGCACCTAGTTGGACTTGGAGCA GAATGCTCACATCTCTAGGGGCATCTATTTGCCACTTAATTTGTTACCATCTAGGGGCTCCTCTTTGGTGTACATGTCTGCTCCAAAGGAGTCTCTTTTT CAGATAGGCAGGGAGACTGGTCTGCCTTGTCAAATTCCTGAGCTTTTTCTGATTCATTTTGACATCTAGTTTAATGTTTTGGGGCATATGAATGTTTTCA TAGGAATGTTTTCTGAAATAATGCAGTTGTATATCTGTATGAAACAATTGCATGCCCTTTTCTTTTGTTTTCTTCTGTGGTAATTTTATATTTGGAGAGT ATATCGGGCATTTTCCTTTTATCCGAAGTAACACATTTGTAAATTACCTTTTTGAGTACATTTTTTGTTAGCTTGTAAACTTTGTTGTAGAAATTCTTTT GGAGGTTTACATACATATTGGTTATAACTTTGCCCCTTGCAGGCCCCAGTTAACTATAGCAACCGCCATAATCTTTTGTCACCGGTTCTTCCTTCAACAT TCTCATGCAAAGAATGACCGAAGGGTGGGTTGTTGCACTTTATAATTGATATCGTGAGTGGCCTGTCTAGTAAGTACAGAGCATCGCAACTGTCTGTATG TTCCTGGCTGGGAAGGTTGAAGAAACGCCTCGCCCACTAAAGGATGTTATTCTGATTTCTTATGAAATCATTCACAAGAAGGACTCTGCTGCTGCACAGC GGATAAAACAGAAGGTGTTCTATAATTTTCTGTGCTTTCACTATTTCATTTCATACATTCTCGTTCTGGATTTTTCGGAAATCACATTGCTGCTAGGTTA TAATGCTTGCTCAGACATGGATGGGGCCTCAATTTTGAATTCCTATAAAATGTTTGGCTGGCTTGTAAATTATGATAACCATTTTTGTTTACATGTTTCA TTACTACTTACTACCTAAATAGAATTGTTTGTCTGGAATTATATAATTTATTTAACGTTCTTTCTCTGTACGATTGTACATGCCTGCCTCAATTGTCTGT ATCTCTTCATGTTTTGGCCTCTCTTTCTCTTGTATGTAACATTATTTTAAAATTTGTTCAAGAAAGGTCGTAATCATTGCAGGACGTATATGAGCAGCAG AAAGAGTTGATTTTATTTGGAGAGAGGGTCGTACTTGCCACTTTGGGTTTTGCCTTTAATATTCAACATCCTTATAAGCCCCTTGTTGAAGCCATAAAGA AGTTCAATGTCTCAAAAAATGCACTTGCACAAGTTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_154385; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_359620
| Blastp | Cyclin-T1-3 from Oryza sativa with 90.48% of identity |
|---|---|
| Blastx | Cyclin-T1-3 from Oryza sativa with 87.76% of identity |
| Eggnog | NA(ENOG410ZAZC) |
| Kegg | Link to kegg annotations (4349827) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419549.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |