Ll_transcript_359232

• Id Trinity: TRINITY_DN47654_c4_g1_i13
• Name Transcript: Ll_transcript_359232
• Sequence: TGGGCACATTGCCTTATCACATATGACCTTGAAAAAGATTATCCAAATGTAATCAAGTGGTCAATCTCTACAAAATCACCCTGCCCCACCAATCATCATT TCATTTCATTTCACATCCTCTAACTTTGCAACAACACTACCCATCATCATTTTATCACTATCCTTATACTCATGGCCATTGCTCAAAAATGGCTCACACA CTTATCCAACACTAGACACAACAATCTCTTTGCTTCAAGGAAGCAACAACAACAACCCATGTGTTTCATCCAACACCATAGGCTTGTGTGCCATGGGTGC TACCTTTCAATGAATGGTTGCATAGAAGGACAAGACAAGGAAAAAAACCATGTTGGAACAATAGAAACAAGAACATTGGAACCAGTTACATCACTTGCAA TGGCTATGTATAACCTTAACAATGCAATTTCACAATTGAAAACAGAGCCACCATTTTATACCTCTTCAGGAATTGTAAGGTTGCAGGTTCCAATTGAAGA GAAGGTTGAGGCCATTGATTGGCTTCATTCTCAGAACCATCTTCTCCTTCCTCGTTGCTTCTTCTCTGGGAGGGAACAAAATGAAGATAACTTGGTCAGT GTTGCTGGTGTTGGTTCTGCTGTTTTCTTTTGCCATTCTCATCCCTTTTCTTATTGGGATTGGAGATCCATAAGGAGGTTTCTTTCTGAGAGATGTCCAT TAATCCGTGCATATGGAGCTATCCGTTTCAATGCAAAAGCTAAGGTCTCATCAGAGTGGCAGGCTTTTGGTTCTTTCTACTTCATGATTCCTCAGGAGGA TCAATGCTTACAACAACTATTGCATGGGATAATGCTCTTTCTAGGACATGGGAAAATGCAATCAATGCACTTGAAGCAACATTTTGCAAGGTTTCTTCTT CCATTGTGAAGTCCCCTAAACAAGCTCCTCCAACATTAATATTAAGCAGCCATAACATTCCCAGCAGAGTAGATTGGCATCTTTCTGTCAATAGAGCTTT GCAGATGATAAAACAAAATGATTCCTCACTAACCAAGGTTGTGCTAGCTCGTAGCACCAGAGTTGTGCCCACTGCTGATATTGATCCTCTGAAGTGGTTA GCTTGCTTAAAGGATGAAGGTGCAAATGCTTACCAGTTTTTCCTTCAGCCTCCTAATGCACCTGCATTTATTGGAAACACAGTAAGTGTAGCATGTGTCT GACATCTGACTATAAAGTAGGATGATTTATATATTTAAATCTTTATTTAAATCTTTAGTTTGACACAATGGTAAAGTTGTTTGTCTCGTGACTGGAAATC ACGGGCTCAAATCCTGGAAACAACTTCATTTGGAGGGTAAGACTGGGTATATTTAGCCTCCTGTACTGAACCATTCTTTTTATGCTATGTAGTGATATTG TGCTGAACATTCCACAGCAAGTGTTGAAGGAATAAATGTTACACAAATCATTTAAGTCACTTTCTGTTTCTAATTGTGCTTTATAAGTTTATGTTCATCA GCTGGATAACCCTTTCAACAACTGTTTTCTGAGTTTAATCAGCAATGATACATTTTCCATTTTAATTTTTTATGAACTTGATGAATAGCCAGAGCAACTA TTTCACAGAAAATCTCTCCACATTACTAGTGAGGCTTTGGCTGGAACCCGTGCTAGAGGATTGTCACCTGCACTGGATTGCCAAATTGAACTAGACTTAC TTACCAGTCCAAAGGATGACAATGAGTTTACTATAGTGAGAGAAACCATAAGAAGAAAATTAGAGGCAGTATGCGAAAAGGTTGTAATCAAGCCAAAGAA AATGATAAGAAAGCTCCCCAGAATCCAACATTTATTTGCTCAACTAGCTGGCAGGTTAGAAAGGGAAGAAGATGAGTTTGAGATCATGTCATCTCTTCAT CCAAGCCCAGCAGTGTGTGGGTATCCAACAGAAGAGGCACAACTTTTAATTGCAGAAACAGTATTTGATAGAGGGATGTATGCTGGACCTGTTGGTTGGT TTGGAGGAGGAGAAAGTGAGTTTGCTGTTGGCATTAGGTCAGCATTGGTGGAAAAGGATCTAGGTGCATTGATATATGCTGGAACAGGAATAGTAGAAGG AAGCAATCCTTACTTGGAATGGGATGAGCTAGAACTGAAGACATCTCAGGTAAGTTTTCGAGTCTCACCTACGACAAAAAGACTAACATACTAATAATTG CCGATAAAATAAAACTATATTTGTACAAAGGTTGACTACCTTAATGGATGTTGATATGTTACAGTTCACCAAGTTGGTCAAACT
• Tissue: pods
• Gene name: LI_gene_154401;
• Additional information: details;

Expression of Ll_transcript_359232

FPKM

• PAB: 0.5
• PNAB: 0.7
• PS1: 1
• PS2: 0.3
• PS3: 0.4
• PW1: 0.6
• PW2: 1.2
• PW3: 1.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_359232

• Blastp: Isochorismate synthase, chloroplastic from Catharanthus with 51.28% of identity
• Blastx: Isochorismate synthase 2, chloroplastic from Arabidopsis with 68.95% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (CAA06837)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464665.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;