Id Trinity | TRINITY_DN47654_c4_g1_i19 |
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Name Transcript | Ll_transcript_359241 |
Sequence | GGTGCCATTATTTATTGGTTTCTTTTCTTTCCAGCCTAATTTTCCCCCTCTTGTATCCTCATTTCATCAAAGTTGGATGATCAACAATTCCAAAAAAAAG GTAGCTAATGTATCAAATTGGAAGTTGTTGTCAATGCCTGCAGATTAAGAATGTTCTGTGAATTCCTTTTTTTGTATTCCCCCCTTTTACAAAAAGAAAT AGTAAGTTTCTTTTATTTTTCCTTTGTGCTGTCCTGTAAAGAAAATCGTACATTTTGTTAGTGATGGATTTCATGTTGACGTATCATTCATTTTGTATTA CTTTTTTGAAAAGTCAATAATGGTTAAACACGAATGGTGGAAGATATAGCGACAATATATAAAACTCGTAAACTGTGTACTTTTTCTTTCATGTTTGTGT TATTATTTGAGAAAAAACTTGTATGTGCTTACAGTATACGGGATTTTTATATTGTCACTGCATCATTTATCATTCATACTCATGTTTGATGTTCATTGAA TTTAAGTAATACAAATGAATGTGGATAATATACTGACTGTGTATAGATATTTTGCGGCATCAGTAGCTAGAGATATCAAGCCGAATAAAAATAATTGACA GGTTGAGTTTAATGAGCTTGAAGGAGGATCAATGCTTACAACAACTATTGCATGGGATAATGCTCTTTCTAGGACATGGGAAAATGCAATCAATGCACTT GAAGCAACATTTTGCAAGGTTTCTTCTTCCATTGTGAAGTCCCCTAAACAAGCTCCTCCAACATTAATATTAAGCAGCCATAACATTCCCAGCAGAGTAG ATTGGCATCTTTCTGTCAATAGAGCTTTGCAGATGATAAAACAAAATGATTCCTCACTAACCAAGGTTGTGCTAGCTCGTAGCACCAGAGTTGTGCCCAC TGCTGATATTGATCCTCTGAAGTGGTTAGCTTGCTTAAAGGATGAAGGTGCAAATGCTTACCAGTTTTTCCTTCAGCCTCCTAATGCACCTGCATTTATT GGAAACACACCAGAGCAACTATTTCACAGAAAATCTCTCCACATTACTAGTGAGGCTTTGGCTGGAACCCGTGCTAGAGGATTGTCACCTGCACTGGATT GCCAAATTGAACTAGACTTACTTACCAGTCCAAAGGATGACAATGAGT BLAST |
Tissue | pods |
Gene name | LI_gene_154401; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_359241
Blastp | Isochorismate synthase 2, chloroplastic from Arabidopsis with 55.81% of identity |
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Blastx | Isochorismate synthase 2, chloroplastic from Arabidopsis with 56.28% of identity |
Eggnog | isochorismate synthase(COG1169) |
Kegg | Link to kegg annotations (AT1G18870) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019464663.1) |
Pfam | chorismate binding enzyme (PF00425.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |