| Id Trinity | TRINITY_DN47656_c1_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_360640 |
| Sequence | TATAATACTATAATTTTAGTCCCCAAGATATATGTTATTTATAAAATAATTATCAATAAACTCTATATAAGAAAATTTTCCACACCTATTTCATAATAGA ATATATTTATTTCAAAATGAAATCTCCCTCATCAACCCCTCTCACTTTTCTCCATTTCACTACACCTAGAATGCAATAGAACATATAAAGAGAGAGAGAA ACCAAACACTAGTACTCACTTTGCGTGTTATTATTGTGTTCATTATTATTGTTAGATAGATAGACATATCCAAACTCCATAAACAGAAGCATCTTCCAAT ACCCCAAGAGTTTGGTAGCATGTGCTTCTCTTTATGATGGGAAAGTGGTTTTCTACATTTGGCCATTAAGTTTTTGTTTTAAGTTATTATGGGTGAATTT GGCGTTTCACACAAGGAACCTAATAAAAGTAGTGTTAGTACTACTACTACTACTACTACTTCTAGTAGTGTTGTTGGGTTGGGTTTGAAGAAGTTGCAGC ATACCCTTGAAGCATTCCCTAGTAATAAGAATAATATGATGATGCTGCATCATAATCATCACCACCATCCACTGTCACAACCCTTTGATAATGATCTCTC TGGTGATGGTGATGGCCCTGTTCACACTACTTATATGTCTAATTTAACTAATCATATAAACCTTGTTACAACTACTGGTTCTTATTCTGCTCTTGGTGCT GGTGCTATTGATGGTGCTGCTTCTTCTGTACCTGTAAGAACTTTGCAGCAGCAGCCTTTTGATATTTCTGGTTATTATACTTCTGGTACCACCACTTACC CAGCCTTTAAATCCTCAGGTTTGTTTATAAACACTTGTTTCTGACTAGTATTATCTGAAAGGTTGAATCTTTTTTATATTGGAAAAAGTATAGGGTCAAA AGAGAGATGTAGTTTTGACTTGTATCTTTCTTTGGTTGTGTTTATTATAGCAGAAGTGATGGCTGCTTCATTGGGGTTTCCTTTCACAAGTGCACAATGG AAAGAACTTGAAAGACAAGCTATGATTTACAAGTACATGATGGCTTCTGTTCCTGTTCCTCCTCATCTCCTTATCCCAAGTTATTCTTCCTCCACTTGTA TGACCCTTTGTTAAATTTAACTTCTTCCTTTCATCAATTTTTTCATGTCTTTGAGTTACTATACCTATTTAAGAACATACCCTTATGCCTTTTCTGTCCT TTTTATTCTACTCCTCATCAAAAGTTTGTGCCTTTGGTACTGCCTCAAGTGCTTGTAGTTTTGCCTCAAAGATTATGCCTTTTGTTAATTCCATCAACAA CCCTTTATTCTTTCCATGATATGTTGCTTTATTTCAGTCTGTGTCTATTTTTTCACTGTTTCTTGAAATCTGCATTTCTTTTTCACTTTTTCTCTTTTGG ATTAGTGAATGGTGGTTTCAATTTGAGGCTATCAAGCAGTGATCCTGAACCAGGTAGATGCAGAAGAACAGATGGTAAGAAATGGAGATGTTCAAGAGAT GTAGCACCAAATCACAAATATTGTGAGAGGCATATGCATAGAGGTCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTCACACCAATAACAACAACCAGAACC AGATCAAGAGGGCTAGAAATGATTCTAATCCTTTTCCTACTACTGATAATATCACAACCAGAAAAGTTGTTTCTACTTCTCAGTGTGTTGCTTCTGGTAC CAATCAGCAATACCTTCATTCTTCTTCCCTTTCTCTTCATAATTTTGGTGTCAAAACTAGAAACTTTGACTCTGTGGCTTCTGTTCCTTCAAATAAAGAA ACCAGGTGAGGAATTCAAGTTTAGATTCAATATGTCTTAGTTTCTATTAAGGTGTTTTCATTCTCCCCTGCATGTATGTAGTCATAGACCTCTCTGGCTA GTTCAAAATAATAAAACCCCCACAATAAAAACCTATATATCCTGATAACTTTGAGTGACAAACTAGTATTCTCTTATGATTCCTTATTCATTACATATTT ATATTTTTTGAAACTTTAAGTTGTGTTCTAAACTTTGGAGGCCCTAGTATAGGTAACAAGTTTTGTCATAAAACCATTTTTATATTGTCTGCCTATCTTC CCTTATTCTTTATTTTGTAGCTAAGGCAATGCTTTGTTTGGTTGTCTTCTTCAATGGTTAATAGAGTTTTTACTCTTATTTTGATTCCACACAATATTTT ATAATTTATTAAAATTATCAATAGATTAAGAATGCTTTCTATCTTTTTATTATATCCGCGAATCATCATATATTATTTTTATTTGGTTTTCATAACTCAC TTTTATATTTCCCAACATGTCCAATTTGCTTACTGAGCTGGAACTCCTTAGAGAAATTGAGACATATAAATGAACACTTGCTTAGCGAGCCTAATTCACT TCACAAGTTTGAACTAATGTTGATAAGTCAATTTGGACCAAAGCGACTTCTCAACTCTCTCTCACACTTTCGACAAGTTGTGTCCCATTGAGAAATAAGA ATGTCACTCTAAAAACCAATGTTCTTGAAAATAAGCTTGTCTCCCGTGGTGAACAAGCATAAAAACATTCTTATTTGCTGAACAAGCACAACTACTGTCC TTGCTCTTAGATTACAACTCTTTTAATGGTTGTGATTGATTGTGAAGGGGCTTGGAGTGGATGCTGAATGGGGATTCTATTTCCCTTGGTGCTTCTCACT CAGAATTTCAGAGTCTGATGCATAACAAACTTGGCTTGACTACTGAGAGTTCCTTCAATGACACTGAGCCTCAATATCTGAATTCATTTGCACTCTATAA TTCTGGTGTACTAGATCATCAGAACCAAAACCCTCCTATGTTCCTTAATCCTAATGATTTTCCCATGGAAAATCTCCAATCTCAGAAACCAAGAGGTTCC ATTGATGCTTGGTCAACAGAACAAAACAATGGTAACACAAACAAGTGCAGTATTGGATCTATTGGTAAATTATCTCTTTCTTCTATTGAGCTATCAATGG GAGATGGTTGTGTGCAAGAAGACACAAGCACTATTGACATGGGTTTAGGCCTGATGGAGAATGGAAACAACACACAACACAATGATACTAAAACCCATCT CTCAAATTGGCTCACACCATCATTATCATCATCACATTGGGTGGCTTCAACAACACTTGGTGGTCCATTAGCTGAAGTTCTAAGGCCAAGCACTTTCACT AATGATGCAGCTTCAAATCCATCATCTTCTGTCATAACACATGCTGAATCTAGCAGCAGCGCTTTGGGAACATTGGTTTCATCACCTTCTGGTGTTTTGC AGAAAACACTTGCTTCATTTTCTGACAGTAGTAGCAATAGCAGCCCAAGGGTTGCATCATCAAGAGCCAATAATTCCGATATTGCCTTCAGGTTCAACCA AAAGTAAATTAAAGTTAGCATCTTTCTACTCTGGTTTTACTTCAATGGGACAGTGTTTTTGTAACTTATTTTCCTTGCTTATGTATTTAAATATAAGACT GTGAGCTTGGCACACTTCAGCCCTCTCCAAACCCACTAAGTTGGAGCCTCGTGCATTCGGCCACTTTTTTTTAATGTATTTAACTATGTTGTGCATGTGA AACAGGTGGTTTGTTATATAGTACTGAAAACAATGTAATGAACAGCCTATGTATCTGTTTATGTGATGGAAGTTTTTGTTTGCAGTTTTAATTCCAACTT CATGGAAACGTCACAATGCTACTTAGTTATCTCATTCTCTAACACTGAGTGAAGTAACTATGATGGTCATGGGGCTAGTTTGTTATGTGGTCCTGGCCTA ACTTTGTGTCAACTATCTATCTCTTCAAATCTTCATTGTTCTCCCTTCCTGACAGTATCAACATATCAATAATGTTATTGATCAACATATATCTACC BLAST |
| Tissue | pods |
| Gene name | LI_gene_154421; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_360640
| Blastp | Growth-regulating factor 7 from Arabidopsis with 36.84% of identity |
|---|---|
| Blastx | Growth-regulating factor 10 from Oryza sativa with 56.82% of identity |
| Eggnog | WRC(ENOG4111821) |
| Kegg | Link to kegg annotations (AT5G53660) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019433510.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |