Id Trinity | TRINITY_DN47656_c1_g1_i6 |
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Name Transcript | Ll_transcript_360643 |
Sequence | ACTACACCTGTTAACCAACAATACACACATATAAAGAGAGAGAAACCCAACACTATAAGTCTGTTTGCTTGTTATTATTATAACCATTATTATTGTAGAT AGATAGACATATCCTAAGGCCATAAACAGAAGCATCTTTCTACAAGCTAAAGAGTTTGGTAGTAGCTTTTCTTTTCATGATGGCAAAGTGTTTTCCTATT TTGGGCAATTACTGTGAGTGTTTGTTTTGAGTTATTATTATGAGTCTATTTGGTTTTTCATACAAGGAACCTAATAAAAATAGTGTTATTACTACTACCA CTACTACTAGTGTTGTTGGGTTGGGTGTGAAGAAGGTGTAGCAGACCCTTGAAGCATTCCCTAGTAATAAGAATAGTGTGATTATGATGTTGCATCATAA TCATCACCACCGTCCATTATCACAACCCTTTGATAGTGATTCCTCTGTAGCTGTTGATGGTGATGGTCCCACTCACACTAATTATATGTCTAATTGGACT AATCATATGAACCTTGTTACAACAACTGGTGCTTATTCTGCTATTGATGGTGCTTGTTCTGTACCTGTAAGAACTTTGCAGCAGCCTTTTGATATTTCTG CTTATTATGCATCTGGTTACCCTGCTTTCAAATCCTCAGATATGATGGCAGCTTCATTGGGGTTTCCTTTCACAAGTGCACAGTGGAAAGAGCTTGAAAG ACAAGCTATGATTTACAAGTACATGATGGCTTCTGTTCCTGTTCCTCCTCATCTCCTTATCCCAAGTTATTCTTCCTCCACTTGTATGACCCTTTGTTAA ATTTAACTTCTTCCTTTCATCAATTTTTTCATGTCTTTGAGTTACTATACCTATTTAAGAACATACCCTTATGCCTTTTCTGTCCTTTTTATTCTACTCC TCATCAAAAGTTTGTGCCTTTGGTACTGCCTCAAGTGCTTGTAGTTTTGCCTCAAAGATTATGCCTTTTGTTAATTCCATCAACAACCCTTTATTCTTTC CATGATATGTTGCTTTATTTCAGTCTGTGTCTATTTTTTCACTGTTTCTTGAAATCTGCATTTCTTTTTCACTTTTTCTCTTTTGGATTAGTGAATGGTG GTTTCAATTTGAGGCTATCAAGCAGTGATCCTGAACCAGGTAGATGCAGAAGAACAGATGGTAAGAAATGGAGATGTTCAAGAGATGTAGCACCAAATCA CAAATATTGTGAGAGGCATATGCATAGAGGTCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTCACACCAATAACAACAACCAGAACCAGATCAAGAGGGCT AGAAATGATTCTAATCCTTTTCCTACTACTGATAATATCACAACCAGAAAAGTTGTTTCTACTTCTCAGTGTGTTGCTTCTGGTACCAATCAGCAATACC TTCATTCTTCTTCCCTTTCTCTTCATAATTTTGGTGTCAAAACTAGAAACTTTGACTCTGTGGCTTCTGTTCCTTCAAATAAAGAAACCAGGTGAGGAAT TCAAGTTTAGATTCAATATGTCTTAGTTTCTATTAAGGTGTTTTCATTCTCCCCTGCATGTATGTAGTCATAGACCTCTCTGGCTAGTTCAAAATAATAA AACCCCCACAATAAAAACCTATATATCCTGATAACTTTGAGTGACAAACTAGTATTCTCTTATGATTCCTTATTCATTACATATTTATATTTTTTGAAAC TTTAAGTTGTGTTCTAAACTTTGGAGGCCCTAGTATAGGTAACAAGTTTTGTCATAAAACCATTTTTATATTGTCTGCCTATCTTCCCTTATTCTTTATT TTGTAGCTAAGGCAATGCTTTGTTTGGTTGTCTTCTTCAATGGTTAATAGAGTTTTTACTCTTATTTTGATTCCACACAATATTTTATAATTTATTAAAA TTATCAATAGATTAAGAATGCTTTCTATCTTTTTATTATATCCGCGAATCATCATATATTATTTTTATTTGGTTTTCATAACTCACTTTTATATTTCCCA ACATGTCCAATTTGCTTACTGAGCTGGAACTCCTTAGAGAAATTGAGACATATAAATGAACACTTGCTTAGCGAGCCTAATTCACTTCACAAGTTTGAAC TAATGTTGATAAGTCAATTTGGACCAAAGCGACTTCTCAACTCTCTCTCACACTTTCGACAAGTTGTGTCCCATTGAGAAATAAGAATGTCACTCTAAAA ACCAATGTTCTTGAAAATAAGCTTGTCTCCCGTGGTGAACAAGCATAAAAACATTCTTATTTGCTGAACAAGCACAACTACTGTCCTTGCTCTTAGATTA CAACTCTTTTAATGGTTGTGATTGATTGTGAAGGGGCTTGGAGTGGATGCTGAATGGGGATTCTATTTCCCTTGGTGCTTCTCACTCAGAATTTCAGAGT CTGATGCATAACAAACTTGGCTTGACTACTGAGAGTTCCTTCAATGACACTGAGCCTCAATATCTGAATTCATTTGCACTCTATAATTCTGGTGTACTAG ATCATCAGAACCAAAACCCTCCTATGTTCCTTAATCCTAATGATTTTCCCATGGAAAATCTCCAATCTCAGAAACCAAGAGGTTCCATTGATGCTTGGTC AACAGAACAAAACAATGGTAACACAAACAAGTGCAGTATTGGATCTATTGGTAAATTATCTCTTTCTTCTATTGAGCTATCAATGGGAGATGGTTGTGTG CAAGAAGACACAAGCACTATTGACATGGGTTTAGGCCTGATGGAGAATGGAAACAACACACAACACAATGATACTAAAACCCATCTCTCAAATTGGCTCA CACCATCATTATCATCATCACATTGGGTGGCTTCAACAACACTTGGTGGTCCATTAGCTGAAGTTCTAAGGCCAAGCACTTTCACTAATGATGCAGCTTC AAATCCATCATCTTCTGTCATAACACATGCTGAATCTAGCAGCAGCGCTTTGGGAACATTGGTTTCATCACCTTCTGGTGTTTTGCAGAAAACACTTGCT TCATTTTCTGACAGTAGTAGCAATAGCAGCCCAAGGGTTGCATCATCAAGAGCCAATAATTCCGATATTGCCTTCAGGTTCAACCAAAAGTAAATTAAAG TTAGCATCTTTCTACTCTGGTTTTACTTCAATGGGACAGTGTTTTTGTAACTTATTTTCCTTGCTTATGTATTTAAATATAAGACTGTGAGCTTGGCACA CTTCAGCCCTCTCCAAACCCACTAAGTTGGAGCCTCGTGCATTCGGCCACTTTTTTTTAATGTATTTAACTATGTTGTGCATGTGAAACAGGTGGTTTGT TATATAGTACTGAAAACAATGTAATGAACAGCCTATGTATCTGTTTATGTGATGGAAGTTTTTGTTTGCAGTTTTAATTCCAACTTCATGGAAACGTCAC AATGCTACTTAGTTATCTCATTCTCTAACACTGAGTGAAGTAACTATGATGGTCATGGGGCTAGTTTGTTATGTGGTCCTGGCCTAACTTTGTGTCAACT ATCTATCTCTTCAAATCTTCATTGTTCTCCCTTCCTGACAGTATCAACATATCAATAATGTTATTGATCAACATATATCTACC BLAST |
Tissue | pods |
Gene name | LI_gene_154421; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_360643
Blastp | Growth-regulating factor 7 from Arabidopsis with 36.84% of identity |
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Blastx | Growth-regulating factor 10 from Oryza sativa with 56.82% of identity |
Eggnog | WRC(ENOG4111821) |
Kegg | Link to kegg annotations (AT5G53660) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019433510.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |