Id Trinity | TRINITY_DN47659_c3_g3_i4 |
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Name Transcript | Ll_transcript_359403 |
Sequence | AATAAATTTAGCTATAATATTTTTTTATAACCAAATATCACACTAAGGATAAAGCACTGCTCCTCCTTCCCTTGTTTCCTGCACAACAAGTATCCAATTC CTCACTCCCATTCACAGAAATGCAAAGATGCAGTTAACCTCTTCTCCAATGCTTCTAAAAATCCCAATCAGCTTCCCAATTTTCTCTCCACACTTCGACT CTAACCAAAACCCTCCTTCTTCCACCGTGCTCCGCTTCTCCCGCTGGAACACCAACACCGACACCGTCAACCACCGCCACTCCTCCTCCGATGATGAACT CGACTCACCTTCCTCTCCTTCGCAACGTTCCATGAGGTACTCCAAATGGAAGAATAAAAAACAACTAGACCAACCTCCCTCTTCGCAATCGCACCCAGCG TTTAGGTTTTCGAACATTCCTAAATCGAAACCTATACCGTTGAAAGAAGCGCCCGATAACATCAAAATGAGCGATGACGGAGTCTCCTACGTCATCGAAG GAGCTCCGTTCGAGTTCAAGTATAGTTACACGGAGACTCCGAAAGCGAAGCCGGTGAAAATGCGTGAAGCGCCTTTCGTGCCGTTCGGTCCAGCCACGAT GCCGAGGCCGTGGACTGGGCGGGCTCCACTGCCGCCGAGCAAGAAGAAGCTGAAGGAATTTGATTCTTTTGTTTTGCCGCCGCCGGATAAGAAGGGGATT AAGCCGGTTCAATCGCCCGGTCCGTTTTTGCCGGGGACTAACCCGAGGTATGTGAAGACGAGGGAAGAGATATTGGGAGAGCCATTGACGAAACAAGAGA TTGGTGACATGATTAGAAGTTGCTTGAAATCTAGTCGCCAACTCAATATTGGAAACTGTAGTCAATGTAGATGCAATTATGTTCCCTATGTGACTGGAAA CAGCAAAACCAAATATTGTGTCTGTAATTGCGGTTGTGGACCACAATTTATAACCTTTTCTTGGTTGTTACCTTTAAGTCAGTGCTGTACAGCTCAAGTC AATGTCAAATTTGCAGTGGCTGCAGTTTATGATGGGACATGGTGTTTGTTGTTATATTCCTTCTGAACTAATGTATAACTTTTGTAAAATCTAGCTGGTG AAATGTGTTTACAGCTTTAGGTTAACTGAGGGGTTATATGATGTTTGTAGTGGGACATAGTATATGAGACCTGGGTGTTACTTTGCACTATTTGCTTATC CTTTGGATGCGAGACTAATATTTTTAGGCTACAGAGTTGTGTGTTTCTACTGACTCGAATCCCTAATATTGCGTAGTTCCCTCGACCAATTATCTTTCTA TCCACTTGTCTGGTTATTGGGAATGGAAAGTTTACTGTTTCTGTGCATTAATTTTTTCTGCTTTAGGTAGAGATGGTTTGACACATAACATGTTGGATAA TATACATGCTCATTGGAAGCGGCGGAGGGTGTGTAAGATAAAGTGCAAAGGAGTGTGTACTGTTGACATGGAGAATGTGTGCCAGCAGTTAGAGGTTGGT TTTTTATGCTTTTGACATCTGATCTAGTGATCTTTCATGATTTTCCCTAATATACTACTATAAATATACACACAGACACACATATAGGGAACAGTTCCCA TTTTAAAAATGTGAGAACAGCAAGTCTAGGCTGTACAACCATACATGAATGATTCAGATTAAAAGTTGTTCAATGGACACATGACCAGTTCAAAAAAGTA ACATGTCATGTTGGGTAATCTCCCAATCACACCTTTATATTTTGCTGCTGTTTGGAGCACTCCTTTGTTCATTATTGGTAATTGGTTGGCTTCTTGATCT AAAAGTCGTTACTTTGTTTCTTTTCTTACAATGGTTTACATTAACATACTTTCGTTTGTTGGATATGCTCCCCGTTATCTGGTTTTCCAGGAAAAGACAG GAGGGAAAGTCATTTTCCGGATGATGGGTGTGCTGTACCTTTTTAGAGGCAGAAACTACAACTATAGAACACGCCCATATTTTCCCCTGATGTTGTGGAA ACCCATTCCTCCAGTATACCCTAAGCTGATTCGGCGAGTTCCAGAAAGTCTAACACTAGACGAAGCAACTAAAATGCGTCAAAAGGGAAGGGACTTGATT CCTATATGCCAGATAGGAAAAAATGGTGTTTACTGTAACCTAGTAAAGAATGTCAGAGAGGCATTTGAAGAGTGTGAACTAGTGCGTATAAACTGTCAAG GACTAAATAAGAGTGACTATCGAAAGATTGGAGCAAAACTAAGGGATTGACTGGAATCATTGTATCATACCTTTTTTTGCGCACATGTTCTTGACTGTAG GATCTTGTTCCATGCACATTGC BLAST |
Tissue | pods |
Gene name | LI_gene_154450; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_359403
Blastp | CRS2-associated factor 1, chloroplastic from Arabidopsis with 47.37% of identity |
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Blastx | CRS2-associated factor 1, chloroplastic from Arabidopsis with 46.47% of identity |
Eggnog | CRS2-associated factor(ENOG410XQZ0) |
Kegg | Link to kegg annotations (AT2G20020) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019429199.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |