Id Trinity | TRINITY_DN47661_c2_g1_i1 |
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Name Transcript | Ll_transcript_361026 |
Sequence | TCGGAATATACCCCAAAATGAGTTAAGTGCTACGATGGTTCAGTAAATGTAGATGTTTCAGCTCGGACAACATTGTCTCCGAGATACTGTGAGAAACAAA AAAAATGTGATTCATATAAGTGAGAACACAACTAGGTCAACTACACTTGCCTCTCCACAACACAACACCGAAATATCATTGTCAAGATCATCAATGGCAC CAATTGCAGTGGGAGATGTGATTCCAGAAGGTATTTTGGCCTATTTGGATGATGATAACAAACCTCAAGCTCTCTCTATTCACTCCTTCTCCAAATCCAA GAAAGTCATCATTGTTGGTGTTCCTGGTGCCTTCACTCCTACTTGTAGCTTGAATCATGTTCCTGGCTTCATTGAGAGAGCAGAAGAGCTGAAAGGAAAG GGTGTCGATGAAGTAATCGTTATCAGTGTGAATGATCCTTTTGTGATGAAATCATGGGCCAATACTTACACAGAGAACAAGCATGTGAAGTTTCTTGCTG ATGGTTCAGCAGTATACACACATGCTCTAGGGCTTGAACTTGACCTTAAAGATAAGGGTCTTGGAACTCGATCTAAGAGGTTTGCTCTTTTGGTTAATGA CCTTAAGGTGAAGGTTGCAAATGTTGAAAATGGAGGAGAATTCACTATCTCTAGTGCTGAAGAGATCATCAAAGCTCTTTGAACAACCCTTGATTTTTTT ATGTGTCTTGTAATGTTTGTGTTTGCTCTTTGACATTAGAATATGTTGGGAACATTTTGCTTTAAATTTGTTGATGTGTGCTCTAGAAAGATATGATATA GGGCATACTATTAGGGAAATAATGAATTGCTTCTATATATCCAATAATAAAATTGTTTTTTTCTTTTCAAA BLAST |
Tissue | pods |
Gene name | LI_gene_154473; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_361026
Blastp | Peroxiredoxin-2B from Arabidopsis with 71.6% of identity |
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Blastx | Peroxiredoxin-2 from Populus with 72.84% of identity |
Eggnog | peroxiredoxin(COG0678) |
Kegg | Link to kegg annotations (AT1G65980) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019436038.1) |
Pfam | Redoxin (PF08534.9) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |