Id Trinity | TRINITY_DN47663_c0_g1_i2 |
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Name Transcript | Ll_transcript_360771 |
Sequence | TGAGACTGGGAGTGGAGAATCCGTGTAGGAATATATATCTGTAATAGGCTTTTAAACTTGAAAGCACTTTTGCTGTTTTGAGTTCTTGCTTCCAACCTGC AAAAACTTGCTCACTTTTTTCTCCTTCCCCTTCCCTGTCCGAGTCCTTTCAAACTTTTGCTATCATGTTAGTCCCTTGTATCGTATAAAAAATATTCTCT CCTTGTGATTATGACTTTGTAACAGTTCCCAGTTTACCCATCTCCAGAACTTGTCGGATATTATACATAGATAAAGAAAATGAAAGCAAGTTTGCTATAT TCTTCACAACAACAAAACACAAATTCATCTTCATATTCTTCTTCTTCTCTTTCTCCTTCAATGGGAATGGTCTATGCAGACATGGGTGCTCTCTCTCTTT GCCCCAATTATGGTGCTGCTGTTTCTACTTCTCAAGATTGTTTAGCCCCTAATGGGGGTTCAAGCTGGAGTTTTCCATTCACGAGGGACTACCATATTGC AAGCAACTTTGAGGAGCAACCCAACAACAGTGATATTGTTATGGAGTATAAAGGGTCTGATTGCAGTGATGATGGGGTTGGGGAAAACAGTGAGCAAACT AACCAAAATGCTAACACTAATGAGGAGAACCCTAATGAGAATCATACCAGTGGAAAAGAGGTAGACACTTCTGGGCAGTCCAAACTCTGTGCAAGAGGGC ATTGGAGGCCTGCAGAAGATTCCAAGCTCAAAGAACTTGTTGCTCTTTATGGCCCCCAGAACTGGAATCTCATAGCTGAAAAGTTAGAAGGGAGATCAGG TTGGAAAAACTAGTGCATAAGGACCTTTAATTAT BLAST |
Tissue | pods |
Gene name | LI_gene_154482; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_360771
Blastp | Transcription factor CSA from Oryza sativa with 90% of identity |
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Blastx | Transcription factor CSA from Oryza sativa with 80% of identity |
Eggnog | Myblike DNAbinding domain containing protein(COG5147) |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019445937.1) |
Pfam | Myb-like DNA-binding domain (PF00249.30) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |