| Id Trinity | TRINITY_DN47666_c0_g3_i5 |
|---|---|
| Name Transcript | Ll_transcript_361002 |
| Sequence | TAAATCGTGGTCCTATTTTTGAGAATTTTTTAATGTCTCACACGTATGCTTCTGTGCAGTATACCCGTTTCAACAACCACAACAACATCATTAGCAGCAG GTTGAACTGTCAGTACAGGGTTGCCATGACTAGCGGCACAGCTGCAGTTGGTGGCAGCAGCAAGACGGTTGGGAGGTGGCTAAAGGACAGGAGGGAAAGG AAGAAGGAGGAAACAAGGGCACATAATGCTCAGCTCCATGCAGCTGTAACAGTTGCCGGGGTTGCAGCTGCCGTTGCTGCTATAGCTGCCGCCACTGCTG CATCATCCAGCTCTGGCAAAGATGAGCAGATGGCAAAGACTGACATGGCAGTTGCATCTGCTGCGACATTGGTTGCAGCTCAATGTGTTGAGGCTGCCGA AGCTATGGGAGCAGAGCGCGACTACCTTGCCTCAGTAGTTAGCTCAGCTGTGAATGTAAGGTCTGCCAGCGATATCACAACGATAACTGCTGCTGCAGCA ACAGCTTTACGTGGGGCTGCCACATTGAAAGCTAGGACCCTCAAGGAAGTTTGGAATATTGCAGCAGTAATTCCAGTGGAGAAGAATTTAGCAGTTGGTG GTGATAGTAGTAGTTGCCATAGTAGGTCTAGTAGTAGCTTCAGTGGTGAACTTGTACCAGAGGAAAATTTCTTGGGTATCTGTAGTAGAGAATTACTAGC TGGAGGTTGTGAACTCCTCAAGCGCACACGCACAGGTGAACTTCATTGGAAATATGTATCTGTCTACATAAACCGGATGAATCAGGTGATTTTTCTTTCC ATCTATTCTATAAGAAAAAAGGTATATCCTTAGATGATTGATTTATAAGTGGTATGTCACTTTCTTGTTTGACGGGAGGATTTATTACTCTATAAAACTA TATAATGCTTTTAGTTCTAGAGGGTAAACTATCACTTAATTATTTGGTCATCAATTAACGTCGTAATGACGTGTATGAACTTGATTGTGGAAAGAGTGTA AAGTTGGGGCACTTAGTATGATGTAAAGCCAAGGGATCAAATAGCTTTAGTTTTCGAAGAAATCAGTAATCAAATCTTCAGAAGCTCTTTTTGCGCAGGT TATGCTAAAGATGAAGAGTAAACATGTTGCTGGGACCATCACAAAAAAGAAAAAGAGTGAGTCTTTTACTTTTTTGTCTCTCTCTTAGTAATAATTTAAC TGATTTGGAGATGGGTCTTGTTCTATTTGGGGATTTGTGAAAGTCATGGTATTTAAAGTTGTAAAAGATCAAAAGGTTTTTCTTTAAGCCAATAAAGTAA CTGGAGATAAGTTAGCTCAAATAATTGGTTGTTGAAGAAAGAACAAATAAGAGACAATATAGTGGACTGATGAGATAATTTCTCCCATGATACGAAGATA TATATTATTCCGTTTCTTTAATCCGATTGCCTTTTTTGAAAATTTGCACAGATGTGGTGCTTGGAGTGATCAAAGATATGCCTGCCTGGCCTGGCCGCCA CTTGTTAGAAGGGGGTGAGAATCGTCGCTACTTTGGTTTGGAGACAGTTATGCGTGGTGTTGTTGAATTTGAGTGCAAAAATCAAAGAGAATATGATATG TGGACTCAGGGTGTATCAAGGCTTCTTTCTATTGCTGCAGAAAAGAGCAACATAAACAGAATTTGAGTTTCTATTTGTTTGAGCTTGAGAAGAAAATAGT ATTTGGGAATAAGATCCACAGTGCTATTAACCATAGGATCCTTTTATATACAATGATATGATAAAATATTTTCATTATTTCACATATAATATAATAACAC TTTTATTATTAAAAAAATACTTAGAATCAAGTACTTATGTCTCCATTAACAAGATGATCCTTGTTCGCCATTAACACTGTATTTTGATACATAGCTGGGT TTTCAACCCATTTGTAAAAAAGAGAATACTAATGACAACGTTATGCCCAATGGGGTCTTTAATAGTGGACAACAAACATTTAATGTTATTAAACTAGAAC AGATGAAGCGGATAACTCATGTGTTAAAGATAAACATTTGAGTGAAATTGTATATTTAAGATAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_154507; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_361002
| Blastp | VAN3-binding protein from Arabidopsis with 62.9% of identity |
|---|---|
| Blastx | VAN3-binding protein from Arabidopsis with 64.63% of identity |
| Eggnog | Plant pleckstrin homology-like region(ENOG4111DWT) |
| Kegg | Link to kegg annotations (AT3G63300) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019451595.1) |
| Pfam | Auxin canalisation (PF05703.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |