| Id Trinity | TRINITY_DN47668_c2_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_360904 |
| Sequence | CTTACAATCTCTCTTTTCCACAGTCGTGGAAAGAAAGGGTAACCCTAAAAACCAAAAAAAAAATTTTAAAAAATACCCAATTCCATTTTCGTAACAAGAG AATGGCGGCTGTAGCAGTTGGGGGTCAAACGGCGTCGCTTTATGTGGGAGATCTAGAGAGCAATGTGAATGAGGGGCAACTATATGATCTGTTCAGCCAA GTGGCACAAGTTGTTTCAATTAGGGTTTGTAGGGATCAAACTCGTCGTTCATCTCTTGGATATGCTTATGTCAACTTTCCTACCCCTATTGATGCGGCGA ATGCGATGGAACATCTTAACTTCACTTCTCTGAATGGGAAACCCATTCGTATTATGTATTCTCATAGAGATCCTAGCGTGAGGAAAAGTGGATTTGCAAA TTTGTTTATTAAGAACCTGAGCACTTCAATTGACAACAAGGGGTTACATGACACATTTGCTTCCTTTGGAACGATACTTTCGTGCAAGTTATCTGTTGAT ACTAATGGTCAGTCAAAAGGGTATGGTTTTGTACAGTTTGATAATGATGAATCTGCACAGACTGCCATCAATAAGTTGAATGGCATGTTGCTAAATGATA AAAAGGTCTATGTTGGACTCTTTGTTCGACGCCAGGAAAGATCCCCATCAAATGGATCACAAAAGTTCACAAATGTGTATGTGAAAAATTTGTCTGAAAC ATATACTGATGAGGACCTGAAGCACTTGTTTGGTCCTTATGGTGCAATAACTAGTGCTGTGGTCATGAAAGACGAGAATGGGAAATCTAGATGTTTTGGT TTTGTGAATTTCCAAACTCCAGATTCGGCAGCTGCTGCAGTTGATAAGTTAAATGGAACCGCAACCAACGGTGACAAGGTTTTATTTGTCGGGAGAGCTC AGAGTAAGGCAGAAAGAGAAGCTGATTTAAAAGCCAGATTTGAGCAGGAAAGGTTAGGCAGATATGAGAAATTACAAGGTGCTAATTTGTACCTGAAAAA TCTGGATGATAGCGTCACTGATGACAACTTGAGAGAGCTGTTTTCTGAGTATGGAACAATTACATCTTCCAAGGTGATGGTTGATTCGCTGGGGCAAAGC AAGGGCTCTGGTTTTGTGGCCTTTTCTACTCCTGAGGAAGCAAATAAAGCTTTGAATGAAATGAATGGAAAGTTGATTGGACGGAAGCCTCTGTATGTTG CTGTGGCCCAGCGCAAAGAAGAAAGGAAGGCTCGTTTGCAGGCTCAGTTTTCGCAAATCCAAGCGCCAGGTGCAATTGCACCTCTTCCTGCAGGAATTCC TGGATATCATCCAGGGACTCCACGATTTGCCCCTCAACAGTTGTACTATGGACAAGGAACACCTGGTCTCATACCACCTCAGCCAGCAGGATATGGTTTC CAGCAGCAACTCATGCCTGGAATCCGGCCCGGTGTTCCTCCTAATTATATTATGCCATACCAATTTCAGAGACAGGGTCAGCCTGTGCAGAGGGTTGGTG CTCGACGAGCTGGAAATCTCCAACAAGTTCAGCAGAACCAGATGCTACACCATAACTCGAACCAAGGGTTTAGATATGGTAGGAATGGCATAGATTCAGT GGTGCCATTACCCTTTGATGGCTCTGGAGTTACTGAAGCTCCTATTGATAATCAGCATCCTGGAGAATTATCTAACACACTTGCCTCGGCTTTGGCCTCT GCTACCCCAGAAAATCAGCGAACGATGCTGGGCGAACATCTGTATCCGCTGGTGGGCCGTCTTACGCCGAGCAGCCAGACAGCAAAGGTCACAGGAATGT TGCTGGAAATGGACAAGTCAGAGGTAATCCATCTGATTGAATCTCCTGATGAATTGAAGATAAAGGTGTCCGAGGCATTACAAGTCCTTCGCGAAGCTGG ATCGGGCTCTGATGTTGGTGATCAGCTTGGCTCATTGTCATTGAACAATGAAATATAGTTGCAGTGGTAGATAGATATCATGCATCATATGTGGATAAGG TTTCAATGCCTTATGGAGCATATCCAACCCTCCTGGTCTATTGAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_154521; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_360904
| Blastp | Polyadenylate-binding protein 5 from Arabidopsis with 56.75% of identity |
|---|---|
| Blastx | Polyadenylate-binding protein 5 from Arabidopsis with 56.75% of identity |
| Eggnog | poly(A) binding protein, cytoplasmic(ENOG410XR5X) |
| Kegg | Link to kegg annotations (AT1G71770) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449781.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF13893.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |