Ll_transcript_360906

• Id Trinity: TRINITY_DN47668_c2_g1_i3
• Name Transcript: Ll_transcript_360906
• Sequence: CTTACAATCTCTCTTTTCCACAGTCGTGGAAAGAAAGGGTAACCCTAAAAACCAAAAAAAAAATTTTAAAAAATACCCAATTCCATTTTCGTAACAAGAG AATGGCGGCTGTAGCAGTTGGGGGTCAAACGGCGTCGCTTTATGTGGGAGATCTAGAGAGCAATGTGAATGAGGGGCAACTATATGATCTGTTCAGCCAA GTGGCACAAGTTGTTTCAATTAGGGTTTGTAGGGATCAAACTCGTCGTTCATCTCTTGGATATGCTTATGTCAACTTTCCTACCCCTATTGATGCGGCGA ATGCGATGGAACATCTTAACTTCACTTCTCTGAATGGGAAACCCATTCGTATTATGTATTCTCATAGAGATCCTAGCGTGAGGAAAAGTGGATTTGCAAA TTTGTTTATTAAGAACCTGAGCACTTCAATTGACAACAAGGGGTTACATGACACATTTGCTTCCTTTGGAACGATACTTTCGTGCAAGTTATCTGTTGAT ACTAATGGTCAGTCAAAAGGGTATGGTTTTGTACAGTTTGATAATGATGAATCTGCACAGACTGCCATCAATAAGTTGAATGGCATGTTGCTAAATGATA AAAAGGTCTATGTTGGACTCTTTGTTCGACGCCAGGAAAGATCCCCATCAAATGGATCACAAAAGTTCACAAATGTGTATGTGAAAAATTTGTCTGAAAC ATATACTGATGAGGACCTGAAGCACTTGTTTGGTCCTTATGGTGCAATAACTAGTGCTGTGGTCATGAAAGACGAGAATGGGAAATCTAGATGTTTTGGT TTTGTGAATTTCCAAACTCCAGATTCGGCAGCTGCTGCAGTTGATAAGTTAAATGGAACCGCAACCAACGGTGACAAGGTTTTATTTGTCGGGAGAGCTC AGAGTAAGGCAGAAAGAGAAGCTGATTTAAAAGCCAGATTTGAGCAGGAAAGGTTAGGCAGATATGAGAAATTACAAGGTGCTAATTTGTACCTGAAAAA TCTGGATGATAGCGTCACTGATGACAACTTGAGAGAGCTGTTTTCTGAGTATGGAACAATTACATCTTCCAAGGTGATGGTTGATTCGCTGGGGCAAAGC AAGGGCTCTGGTTTTGTGGCCTTTTCTACTCCTGAGGAAGCAAATAAAGCTTTGAATGAAATGAATGGAAAGTTGATTGGACGGAAGCCTCTGTATGTTG CTGTGGCCCAGCGCAAAGAAGAAAGGAAGGCTCGTTTGCAGGCTCAGTTTTCGCAAATCCAAGCGCCAGGTGCAATTGCACCTCTTCCTGCAGGAATTCC TGGATATCATCCAGGGACTCCACGATTTGCCCCTCAACAGTTGTACTATGGACAAGGAACACCTGGTCTCATACCACCTCAGCCAGCAGGATATGGTTTC CAGCAGCAACTCATGCCTGGAATCCGGCCCGGTGTTCCTCCTAATTATATTATGCCATACCAATTTCAGAGACAGGGTCAGCCTGTGCAGAGGGTTGGTG CTCGACGAGCTGGAAATCTCCAACAAGTTCAGCAGAACCAGATGCTACACCATAACTCGAACCAAGGGTTTAGATATGGTAGGAATGGCATAGATTCAGT GGTGCCATTACCCTTTGATGGCTCTGGAGTTACTGAAGCTCCTATTGATAATCAGCATCCTGGAGAATTATCTAACACACTTGCCTCGGCTTTGGCCTCT GCTACCCCAGAAAATCAGCGAACGATGCTGGGCGAACATCTGTATCCGCTGGTGGGCCGTCTTACGCCGAGCAGCCAGACAGCAAAGGTCACAGGAATGT TGCTGGAAATGGACAAGTCAGAGGTAATCCATCTGATTGAATCTCCTGATGAATTGAAGATAAAGGTGTCCGAGGCATTACAAGTCCTTCGCGAAGCTGG ATCGGGCTCTGATGTTGGTGATCAGCTTGGCTCATTGTCATTGAACAATGAAATATAGTTGCAGTGGTAGATAGATATCATGCATCATATGTGAGTCATT TTTTCTTGGGACTCAATGAGCTATCAATGTTTGAGGTTATATCAAGCTCACAATTTTTATCCGGATCATGTTTTCTTTTGCGCGATTATTGAGTTAGCAC CGAGGGAATGAAGGATTTATTGTGTTAGACTTTTATGATCTTATTTCATTTAGGATTGAATTGGCAGTAAAGGATTTGGTTTATTATTAGCCTTTGACAA TAATTTTGATTGTTTAAACCTTACATTATGAAATGACTTGGGATTTTGATAGACATCCATGGTCTTTTGTTTTAAATTAAATATTTATCTCCTTGTGTAT CTAATTTGGGTTTGGGATTCCAACCCAGGTGGATAAGGTTTCAATGCCTTATGGAGCATATCCAACCCTCCTGGTCTATTGAAG
• Tissue: pods
• Gene name: LI_gene_154521;
• Additional information: details;

Expression of Ll_transcript_360906

FPKM

• PAB: 3.8
• PNAB: 20.2
• PS1: 9.6
• PS2: 11.7
• PS3: 13.2
• PW1: 8.1
• PW2: 5.8
• PW3: 2.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_360906

• Blastp: Polyadenylate-binding protein 5 from Arabidopsis with 56.75% of identity
• Blastx: Polyadenylate-binding protein 5 from Arabidopsis with 56.75% of identity
• Eggnog: poly(A) binding protein, cytoplasmic(ENOG410XR5X)
• Kegg: Link to kegg annotations (AT1G71770)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449781.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF13893.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;