Ll_transcript_360913

• Id Trinity: TRINITY_DN47668_c2_g1_i6
• Name Transcript: Ll_transcript_360913
• Sequence: CTTACAATCTCTCTTTTCCACAGTCGTGGAAAGAAAGGGTAACCCTAAAAACCAAAAAAAAAATTTTAAAAAATACCCAATTCCATTTTCGTAACAAGAG AATGGCGGCTGTAGCAGTTGGGGGTCAAACGGCGTCGCTTTATGTGGGAGATCTAGAGAGCAATGTGAATGAGGGGCAACTATATGATCTGTTCAGCCAA GTGGCACAAGTTGTTTCAATTAGGGTTTGTAGGGATCAAACTCGTCGTTCATCTCTTGGATATGCTTATGTCAACTTTCCTACCCCTATTGATGCGGCGA ATGCGATGGAACATCTTAACTTCACTTCTCTGAATGGGAAACCCATTCGTATTATGTATTCTCATAGAGATCCTAGCGTGAGGAAAAGTGGATTTGCAAA TTTGTTTATTAAGAACCTGAGCACTTCAATTGACAACAAGGGGTTACATGACACATTTGCTTCCTTTGGAACGATACTTTCGTGCAAGTTATCTGTTGAT ACTAATGGTCAGTCAAAAGGGTATGGTTTTGTACAGTTTGATAATGATGAATCTGCACAGACTGCCATCAATAAGTTGAATGGCATGTTGCTAAATGATA AAAAGGTCTATGTTGGACTCTTTGTTCGACGCCAGGAAAGATCCCCATCAAATGGATCACAAAAGTTCACAAATGTGTATGTGAAAAATTTGTCTGAAAC ATATACTGATGAGGACCTGAAGCACTTGTTTGGTCCTTATGGTGCAATAACTAGTGCTGTGGTCATGAAAGACGAGAATGGGAAATCTAGATGTTTTGGT TTTGTGAATTTCCAAACTCCAGATTCGGCAGCTGCTGCAGTTGATAAGTTAAATGGAACCGCAACCAACGGTGACAAGGTTTTATTTGTCGGGAGAGCTC AGAGTAAGGCAGAAAGAGAAGCTGATTTAAAAGCCAGATTTGAGCAGGAAAGGTTAGGCAGATATGAGAAATTACAAGGTGCTAATTTGTACCTGAAAAA TCTGGATGATAGCGTCACTGATGACAACTTGAGAGAGCTGTTTTCTGAGTATGGAACAATTACATCTTCCAAGGTGATGGTTGATTCGCTGGGGCAAAGC AAGGGCTCTGGTTTTGTGGCCTTTTCTACTCCTGAGGAAGCAAATAAAGCTTTGAATGAAATGAATGGAAAGTTGATTGGACGGAAGCCTCTGTATGTTG CTGTGGCCCAGCGCAAAGAAGAAAGGAAGGCTCGTTTGCAGGTGAGCTCATCTATTGTTCTTCTCATTGTTCATGTACGATTTAAATTAGCATTAGGATT GAACATGACTAAATCAATGATTTAAATTGTGATTACTTCCTTCTCAAGAAGAAGTAGCTTATGGTTTTAGAGGTTATCATTCATTGAAATATTCATTTAT GATTCCTAATTTATAACACATGGTTATACCGTATAAGTTGTCATTATTTCTTATCCCCTTTTATCTTTTTTGAAATTTTATGTAAAAAACTGTATTATAC ATGGGTTACTTTTGGATCTGCAATTCTTACCCTTTCTGTCCAAATCCTCATTTGTGGGTAGAAGTTTATCTTTGTCATATTATATCCCTCCAAGACTTGT TCATTTTTATTTTTTGTAGTTTTCAAGCATAAAACTATTTTAGTCACATTTACTGGCCTTTTCGTTATATATTTTCCATAAACTCGGTAGGTAGTAGTGT CACAAATTGACTTGTCTGCAGGCTCAGTTTTCGCAAATCCAAGCGCCAGGTGCAATTGCACCTCTTCCTGCAGGAATTCCTGGATATCATCCAGGGACTC CACGATTTGCCCCTCAACAGTTGTACTATGGACAAGGAACACCTGGTCTCATACCACCTCAGCCAGCAGGATATGGTTTCCAGCAGCAACTCATGCCTGG AATCCGGCCCGGTGTTCCTCCTAATTATATTATGCCATACCAATTTCAGAGACAGGGTCAGCCTGTGCAGAGGGTTGGTGCTCGACGAGCTGGAAATCTC CAACAAGTTCAGCAGAACCAGATGCTACACCATAACTCGAACCAAGGGTTTAGATATGGTAGGAATGGCATAGATTCAGTGGTGCCATTACCCTTTGATG GCTCTGGAGTTACTGAAGCTCCTATTGATAATCAGCATCCTGGAGAATTATCTAACACACTTGCCTCGGCTTTGGCCTCTGCTACCCCAGAAAATCAGCG AACGATGCTGGGCGAACATCTGTATCCGCTGGTGGGCCGTCTTACGCCGAGCAGCCAGACAGCAAAGGTCACAGGAATGTTGCTGGAAATGGACAAGTCA GAGGTAATCCATCTGATTGAATCTCCTGATGAATTGAAGATAAAGGTGTCCGAGGCATTACAAGTCCTTCGCGAAGCTGGATCGGGCTCTGATGTTGGTG ATCAGCTTGGCTCATTGTCATTGAACAATGAAATATAGTTGCAGTGGTAGATAGATATCATGCATCATATGTGAGTCATTTTTTCTTGGGACTCAATGAG CTATCAATGTTTGAGGTTATATCAAGCTCACAATTTTTATCCGGATCATGTTTTCTTTTGCGCGATTATTGAGTTAGCACCGAGGGAATGAAGGATTTAT TGTGTTAGACTTTTATGATCTTATTTCATTTAGGATTGAATTGGCAGTAAAGGATTTGGTTTATTATTAGCCTTTGACAATAATTTTGATTGTTTAAACC TTACATTATGAAATGACTTGGGATTTTGATAGACATCCATGGTCTTTTGTTTTAAATTAAATATTTATCTCCTTGTGTATCTAATTTGGGTTTGGGATTC CAACCCAGGTGGATAAGGTTTCAATGCCTTATGGAGCATATCCAACCCTCCTGGTCTATTGAAG
• Tissue: pods
• Gene name: LI_gene_154521;
• Additional information: details;

Expression of Ll_transcript_360913

FPKM

• PAB: 0.3
• PNAB: 1
• PS1: 0.4
• PS2: 0.5
• PS3: 0.3
• PW1: 0.3
• PW2: 0.3
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_360913

• Blastp: Polyadenylate-binding protein 3 from Arabidopsis with 62.76% of identity
• Blastx: Polyadenylate-binding protein 3 from Arabidopsis with 62.76% of identity
• Eggnog: poly(A) binding protein, cytoplasmic(ENOG410XR5X)
• Kegg: Link to kegg annotations (AT1G22760)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449781.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF13893.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;