Id Trinity | TRINITY_DN47669_c0_g1_i1 |
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Name Transcript | Ll_transcript_360208 |
Sequence | TTTCGTTGCACGGGACATTACGTTTGAAAACTACGCTGGACCAGAGAAGCACCAAGCAGTGGCTCTCCGTGTTGGAGCTGACCACGCGGTGGTGTACCGA TGTAGCATCATCGGTTACCAAGACACGTGTTATGTGCACTCTAATCGTCAATTCTTCCGCGAATGTGACATATATGGCACAGTTGATTTCATATTTGGAA ACGCGGCAGTAGTTTTTCAAAAGTGTAATTTTTATGCTCGCAAGCCCATGGCCCAACAGAAAAATACCATCACGGCCCAAAATCGGAAAGACCCAAATCA AAACACGGGTATATCCATCCACGACTGTCGTATCCTACCCGCACCGGATCTTGCTACGGCTCAAGGTAGTATCCCAACCTATTTGGGCCGTCCATGGAAA TTGTATTCTAGAACCGTATACTTGTTATCCTACATTGGTGATCATGTACATCCCAATGGATGGTTGGAATGGAATGGAGAGTTTGCATTAGACACATTGT ATTATGGAGAGTACATGAACTATGGGCCAGGTGCGGCCATAGGACAGCGGGTTAAATGGCCCGGATATCGAGTTATCACGTCTACCGTGGAGGCTAACAG ATTCACGGTGGCGCAATTCATATCCGGTTCGGCATGGTTGCCATCCACCGGAGTGGCTTTTTTGGCTGGGTTATCCACTTGAATTCAAGTACAGAACATT GTTACAAAGTTCACACATACCTAATTGGGCAAATAGCTTTTATTTTTGTAGGTGCTACTTTATTTTTTAACATGGCAAAAATTGTAGCTTTTTGGGCTTA ATTTTTTCCTCAATGATGCTAATAATATATATAAGCTGTAAGCAATGTTTTACATATTAGTTCCTTTTTTCCTTCTATGCCAATAAAAAACGTTGTAGTT GACTCCATAAGGTTAGTATCATTTTTTTCCAGTG BLAST |
Tissue | pods |
Gene name | LI_gene_154524; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_360208
Blastp | Probable pectinesterase/pectinesterase inhibitor 61 from Arabidopsis with 80% of identity |
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Blastx | Probable pectinesterase/pectinesterase inhibitor 61 from Arabidopsis with 80% of identity |
Eggnog | pectinesterase(COG4677) |
Kegg | Link to kegg annotations (AT5G53370) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419581.1) |
Pfam | Pectinesterase (PF01095.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |