| Id Trinity | TRINITY_DN47669_c3_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_360224 |
| Sequence | TTTCTGTATTTGCTTCAATATCATCTGTGCCAGACATGATTTGTGACAACATATTCTTGTTCCTTTATCATGATAGTGCTAACCTATGCACTCTACCATT CTTAATTTTTTTCTCCCATCTTTTCCCTTAAATATACAAATAGCCTTTGTCTAATTAAAAAGTCTATAATAACATGTTATAAAGTGAGTTCTTATACATT CCAATATGCATCATTACTTAACAAAACACCTAACTCCAATGCCTACATTCTTATCCTTCTTTTTGGTGCTAGTGTTTCTTGGCCAATGCACCAGCACAAT TGATGTTGCTGGTGCCTATGGTGATGTAGGAGTAGAGTGTTTAATGGTTTCTCCTTCTGAGTTTGTTGATTCATTGAAAACTAGTGTTGATGTTTTAGAA GATGTTACATCCACTCTCTCTAATTTCACTTATTATTCCAAAAATGGTCTTGGAGAGTTTCAGTTTTCTAATGCCTTATCTGATTGCATGGAATTACTTG ACTTGTGTTCAGATCAACTCAGATTTTCTATATCAGCTACTGAGAGTCCCCAAGGTGATGCATCACTATCATTGTCTTAGTACAAATGTATCATATTTGC TTTTTAAACCTACTATTGAGTGGGAATTTCTTTACATTATTCATGTAGCCGAAAATCGAAGTGTAACAATTAGCCCCGATTTTCAGCTATGCGAGTACAT TTTACTCGGTAATAAAAAATATGGAAGGGTATGTTTTTCCTAAATCATTTTTAAAGAAATGTATAAAGAGTGTAACAAAAGTGAGGTGTGAAAATAGTTA TTTTATGTAATTATGTGGAGTTTGAAAACATGGGATGTCAAATTAAATCCACACTTTTGGAAAGAATAAATATTTGCAAATTACTAAACTTAAACACATA CTTATTTTTTTTTGTCATAAAAATTGTTAATAAGTTGAAGTAAGAGTTACTTCAAGAGCAACATACAAATAATTACAAGCAGTATTTAATTCATGTTTTA GGTTTTGACAGTGCATATTCCCTCCTCTAAAACAAACTCATACTTGCATGAGGATATTTTATCATATTATTTAAAAATTGAAAAAAAATTGGTATAGAGA TTTGAAATAATAAGACATTTTTTAATAAGTGAATTATTAAGATTTTCTTTAAATTTATGTAACTTATGTGAGATAGACTTTATATAGTCATGTGTACATA CATGATCATACTATAAAGAGAATAATAACCTGGACTTCCAAAAAGTACATATGGCCTTTGATTTTTCTTTCCCACTTACTTTTTCTCCTCATGTATGAAG TTTGTCTTAAGAAAACTTCACTATATCATATTTTCTGTTGCTAAAGAAAATAATCATTTTATGTTACACAGCTATTTACTTATATGTTAAAAATAAGCCT TATTTTCTCTTATATAGCAATAAATATAAATGATAATATTTGTAAAAAAACAAGTAAACAGCACATAATAATGTCTTATATATTATTAAGGGTATTATCT AATTTGTTGCAGGCATGCATAATAGTACTAGAAACTTAAGCTCTGATTTGAGGACATGGCTAAGTGCAGCACTTACATATATAGACACATGCATGAATGG ACTTGAAGAAACCAATATCAACTTTAACAATCTCTTAATATCCACAAAAATAGACCAAGTGAATTCATTAGTTAAGAATCTTCTCTCCAAGGTAGACCCT ATTTCAGGTCAAGTTTCAACCCAACATGTTGAATTTCCTTCTTGGGTTGAACCACATGACCAGAATCTTCTTCAAACTAGTGAGGTTGCTGTGGATATTG TAGTAGCTGCTGATGGGTCAGGGAACTATAAAACTGTGATGGAAGCAGTGAATGCAGCACCTGAATATAGCATGAGAAGATTTGTGGTGTTCATAAAAAA AGGAGTTTATATAGAGAATGTCGTTATTGATAAGAAGAAATGGAACCTTATGATTATTGGAGAGGGTATGGATGAGACTATCATCTCTGGTAGCTTGTAT AAAACTATGAATTTCACCACATATAAGACAGCTACATTTGGTAAGGACACAGTACTATTTTTACTCTCTACTTCTTTTTCCTGTTCTATTGTGTAGTTTG ATTAATTTGTTGTATATAATAGAAAGTTCAAACTAGGAAACATTACTTAGAAATATTCAAGGAAGTCCATAAAAATATTTTTCAAAAGTAGGAGGCATGA TTTTAAATTCCACTTGTGAAGTGTTATTGTTATTCAAATGACTCATATTTTACTAAGTCTAGTTTTTTCTCCATAAAACAATAATATAAGTTACAAGCTT GAGCAAAAATTGGATAGAGAATTATATACTTAGGTTTGAAAAATATATATGTAAAACTTCTATACATAGAGAATTATGTTTGTATCATTAAAATATTGCA ATGAGAATTGTACATTTCAAGATATATACCATTTCAATGACATGAACATGATTGATTGATTGTGTTTAATATACAAATACTGAAACTAGCAGTGAAAAAT AGATGAACTTGTACTACAATTATAACTCTTGTGAGAGCTACATAAATCCCTTGTCTTCTTTATTAACCAAAATCTCTAATACAATTCTCATTTTTGTTGT TTCCTCTCTCACTTTTTTGCAGCTACAAATGGAAGAGGGTTCATAGCAAGAGACATTTCCTTTAAGAACACTGCAGGACCTGAAAAGAACCAAGCAGTAG CACTAAGATCAGATTCTGACCTATCAGTTTTCTACAGATGTGGTATTTTTGGTTACCAAGACACCCTCTATGCCCACACAATGCGCCAATTCTATAGAGA ATGCAAAATCACTGGCACAGTAGATTTCATTTGTGGTAATGCCACTGCAGTGTTCCAAAACTGCCAAATACTTGCAAAGAAAGGCTTACAAGATCAAAAG AACACCATAACAGCTCAAAGTGCAAGATACCCTAATCAACCATCTTGTTTCTCTATCCAATTCTCAAACATTTCTGCTGATTTTGACCTTCTACCATTTA CTAAATCCATCAAAACTTACCTTGGAAGACCATGGAAAGATTATTCCAAAACAGTTTTCATGCAATGTTACATAAGTGATGTGTTGAGTCCAGAAGGGTG GTTAGAGTGGAATGGAAGCATATATTTGGACACATTATATTATGCTGAGTACAAGAATTATGGACCAGGAGCTGCATTAGATAAGAGAGTGAAATGGCCT GGGTATCATGTGTTGAATGATTCTAACCAAGCTAGTAACTTCACAGTTGCACAATTGATACATGGGGATCTATGGTTACCTTTAACTGGTGTAAACTTCA CTCTTGGATTTTAGTTAATCATGTGGTTATTTAGATAAAAAGTACAAAATAATTACAGTACTTGTAATAAGAAATTTAGGGTTCATGAAGATAATTATGG TTTGATGTTCACATAAATAAAATTTTCATTTTTATTTAGGTCCCTCTCATTATTTTATAATTTATTACAATTCTCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_154527; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_360224
| Blastp | Pectinesterase/pectinesterase inhibitor PPE8B from Prunus with 55.75% of identity |
|---|---|
| Blastx | Probable pectinesterase/pectinesterase inhibitor 44 from Arabidopsis with 66.8% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417377.1) |
| Pfam | Plant invertase/pectin methylesterase inhibitor (PF04043.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |