| Id Trinity | TRINITY_DN47669_c3_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_360220 |
| Sequence | GTGAGAAGTCTCACCTTAGGACCTTTGTGAAATTTCCTAACCTGCTAATTAAGCTAACCAAAAACATTATATTCTCCCTTTTTACCCTTTAAATATTAAA CTTCTCTCCCAACATACACTATCATACTAGACTAGTAGGTATTCATGGCCTCACTATCTTACACTTTTTCCAAAATGCCTCCCATCACCTTCACCTTCAC CTTCATCTTCATGCTCATGTTGTTCCTTGGAGTCTTCACCCCATTGGGTTATAGTGCTCCAACCACTCATTTAGCAGGATCAGCACAACTCAAGGTTTCT CCTTCTCAATTTGTTGGCCTAGTGACCCAAGTTCTTGATGTTTTGAAACAGGTTTCATCCATTTTATCTAAGTTCAGTAGTGGTTTGGGAGATTCTCGTC TTTCTCATGCCATTTATGATTGTCTTGAATTGCTTGATTTGTCCTCTGATGAACTCACTTGGTCTCAATCTGCAACACAAGCTCCCAAAGGGAAGCATAA CAGCACAGGAGACCTAAGCTCAGATTTAAGAACATGGTTAAGTGCTGTCCTTGCAAATCCAGAAACATGTTTGGAGGGATTTGAAGGAACCAACAGCATT GTAAAGGGTCTAGTATCTGCTGGTTTAGGCCAAGTTACCTCATTGGTGAAGCAGCTTCTAACACAGGTGCATCCAACCACAGAGGATTATCACTTTAACA AGGACCAATTTCCTTCTTGGATAAAACCACGTGACAGGAACCTGATCCAATCAAATGGTGTAGCTGTTGATGCTGTTGTGGCTATAGATGGAAGTGGAAA TTATACTAATGTGATGGATGCAGTGTTAGCAGCACCTGATTATAGTATGAAAAGATATGTGATATATATTAAGAAGGGTGTTTATAATGAATATGTTGAG ATTAAGAAGAAGAAATGGAATATTATGATTATTGGAGATGGTATTGATGCAACTGTTATATCTGGTAATAGGAGTTTTATTGATGGTTGGACCACATTTC GATCCGCTACCTTTGGTAAGACCATGCTACTCTTTCTCTATCTATTTTTTTCCGATTCAAGTTATCCAACAATCAAGTTTTAATCTCACTAGGTAGGTTA ACTACATGAATCGAGTCTATTAACATCATTATATATGGTGGCAAAATTACAAGAACTTTTGTAGACTTATATTCTGATTGGGACATCACACAAAAATATG AAGTGATAACAAGCATTATTTTAACTTTACTATAGTCTAGTTTCAACTCTAGGTAGGGACTAATCACCAACATAGTGCATGTCTTCAATAATTGGTAACT CTAAATGGACAAGCATGATGAAATGGATGCAATGGCCAAATCAGTTTTTTGATGAGTAATCACCTCAGAACATTAATAGCTATGCTTAAATAAAACTTCT ACTTTCAACACTATGTAGGGCCTTAGTACCAAGCATTAACTAACATAACACAAATCTTTTTTTTTGGGTACAACATAACACAAATCTGCAACTAACTGAT AATTAAATGAGCATGTGCTGCAACTATAACCTTAATTAAAAAGATTAAAGTCCAAGCCTTCTTAAGTAGCTGAAATATCTGACCAAATTTCTCATGTTAA CATCATTCTTTTCCTTCTTTATGTATATGATCATGTGAAGCTGTCAGTGGAAGAGGATTCATAGCACGAGACATCACTTTCCAAAACACTGCAGGACCAG AGAAGCATCAAGCAGTAGCACTAAGATCAGACTCAGACCTCTCAGTTTTCTACAGATGTGGTATTTTTGGTTACCAAGACACCCTCTATACTCACACAAT GCGCCAATTCTATAGAGAATGCAGAATAAGTGGCACTGTTGATTTCATATTTGGTGATGCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_154527; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_360220
| Blastp | Pectinesterase/pectinesterase inhibitor PPE8B from Prunus with 64.53% of identity |
|---|---|
| Blastx | Pectinesterase/pectinesterase inhibitor PPE8B from Prunus with 65.13% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019455433.1) |
| Pfam | Plant invertase/pectin methylesterase inhibitor (PF04043.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |