Ll_transcript_359933

• Id Trinity: TRINITY_DN47673_c7_g2_i3
• Name Transcript: Ll_transcript_359933
• Sequence: TGATCCTTGAGCAGCATATATACCCCTTTCTCTTCTCACTCTCTCCACACTAAACCATCACCATCCTCATCCAAAAGTTTCTTCCTTTCTTTCTCTGCCT TCAAGGTTTTCCCTTCAGAACTTTGGGTTCTTTGTTCCAACCAAAAGGGTATCTTGTACTATTCCCATGACTAAGGACGTTGAGATTACTGAGCGTGGTT CCTTCTCTGGAAAGGACTATCATGACCCTCCTCCAACACCCTTCATTGATGTTGAGGAGTTCACTAAGTGGTCCTTCTATAGGGCACTCATTGCTGAGTT CATAGCCACTTTGCTCTTCCTTTACATTACTGTTCTCACTGTTATTGGTTACAAGAGCCAGAGTGATGTTAAAGCTCATGGTGATATCTGTGGTGGTGTT GGTATTCTTGGCATTGCATGGGCTTTTGGTGGCATGATCTTTGTTCTTGTTTACTGCACTGCTGGAATCTCTGGGGGTCACATTAACCCAGCAGTGACAT TTGGTCTATTCTTGGCACGCAAGGTGTCTTTGCCAAGAGCAATCTTATACATAGTGGCTCAGTGCTTAGGAGCAATATCTGGAGTTGGGTTGGTCAAGGC TTTCAACAAATCTCTCTACACCAGGTATGGTGGTGGGGCCAATTCCCTCAATGATGGTTATAGCACTGGTACTGGATTGGGTGCTGAGATTATTGGAACC TTTGTTTTGGTCTACACTGTTTTCTCTGCCACTGATCCCAAGAGGAATGCTAGAGATTCACATGTTCCGGTACTTTCTCAATCCTTCACTGTCTTATTTT ATTAACCATGTTCATGGATATATGTTTTCTTAAAATGGGTACATATCAAATTATCAGTAATGTATGTATTGCAGAAGATACTGTTGCTTGATTCATGTGT TGTGTTGAAAACTGTGGTCGGAGGGAATAGTGAATTAGTTTTCACAGAAAATAATCTTATTTTGCTTCTTGGTAAAGGGAAAAATATATTTTTTGCTTCA ATAGTAGTCATGATTCATGTTATGCTGATTTGGATAATTAAATATTCCTCTTTTCATTGATAATATAATATGGTCGATTGTCTTATAATAAACTGGTCTT GTTATCATTTTTCACATGTTATGGGATGTTCTTTGTGTGCACATGTCTATTCTCTCAATTATTTGCCAGATTGGCATGATGGGTGCATCTTATCTGTTTA TATCATTCTCATTTTCCATTTCCTAGAAAATTGTTGGGACAAAAATCATATATACTAATAATACTATTGTTTTACTCATGTAAATTTTTATGATTATCTG AACCAGTCTTCTCTATAGCCTATTTAGTAGCCCTCATAAATCAGCCCAAACTACTTTATTGAGACTTTATACTCAAGAAAATAGTATTAGACAGTGTTCA ATGTTCATGACCTTTTTATTTTTTTGCCTAACTTTTCTTGCTTGGTTTCTTCTAGTCAACTTGTTTGGTTGATAGTTTTCAAACAAAAGAAAGTGCCACA ATTCATTGTAGTTATCATCTTTGATTCAGAAATCTAACCATTATAGTGTGTGCTAAAGCTATCTATTTCCCTCATCATGATTTCCAAATGAAATGATGGC CTTGAGGAACTGTAACAGTAGCATGTGCTTGTAGAACATGGGGGTCCCCACCCCTTGTATGAGTTTTTCTGGTAGTAGTGGTTTAATTTCATGGCCCAAC ATATGATAAAAGGTTACATTATATCATTTCTTTCCAGACCTGGGAAAAGTGGATTCTACACTATTCCTTGAAGGCTTACTGAATCTTTGTTTGCTAATTG TAAAAGGACTTAAAGTGTGTGTTAACTCCAAAATTGAAGTTGAAGTCTTCATAATTGTGTCTGTGATGATGCCTAAGTCATTTTCCCCAAGCTGGAAAGT CTTTAGTGGGAATTTCCACCTTATTCCTGATTTGTCAATATCACTTTGTGTTCCTGTATTCACCTTCTAACACTTTATTAGATTCTCCTAATAAAATAAA GATGAAAGTATGGGCATTTGGATGACCCATTTGTCCCATCTTCCAACCTAATGGTTTATTTTTTATAGAAAAGTTTGGAATAACTTTCCATTTATAATTG TTGCTTTAATGATGCTTTTGTTGTATATATTTGAAGGTTTTGGCTCCACTACCCATTGGATTTGCTGTATTCATGGTTCACTTGGCCACCATCCCAGTAA CTGGCACTGGCATTAACCCTGCTAGGAGTTTTGGAGCTGCTGTTATCTACAACCAATCTAAGCCATGGGATGACCATGTGAGTAATCATAAATCCTCTTC CATATTTTAACTTATTCCTAGTATTCTAGTACTACATCTTAGTTTGTAACTAGTTATGCCAAGTTGTCACAAATAAAAAGATATAAAAAAGAGAATAATG CATCTCCAAACCAATAAAGGTGTGACACATGTACTATTTTGTTTAGTTTTTTGTGAATGTTTTTATAGAAAATGATGAAATATGACACATGTCATGATTT CACTGAGATACTTTATTCTGGATAAAGAATGGTAACATAACATTTTGTCTAATATTATGTTCTTTGTGTCTGGTCAGTGGATCTTTTGGGTAGGACCATT TGTTGGGGCAGCCATTGCAGCTTTCTACCACCAGTTCATCTTGAGAGCAGGTGCTGTGAAGGCTCTTGGATCATTCAGGAGCAACCCCACTGTTTGAGTT ATCATCATATCACCCTCTTCAAGGTTTTAATGGAAACAAAAGATTATTTGAGGATGAAATAATGGGATGTTCTTGTGCTTGTATTTGAAATATTTCTTTA ACCTCTCTCAATTTAAGTTTTCAAGATTGTGGATAAGTGTATTCCCATTAGTATGTTATCTTTATTTCAAGTTGTTCTCTTGTGTCTTCTCTGTACTCAT TTATATTTATGGAAAAATATTCTAGAGTTTGAACTTTCCATTCTTGCTTTTATACACGCCTTTCAATTGCATTAGTGAACAGCACACTGGAGAAAACTAT AAATAGAAAATAATTTTACCCATAACTAAAGGTATCTTTTGG
• Tissue: pods
• Gene name: LI_gene_154566;
• Additional information: details;

Expression of Ll_transcript_359933

FPKM

• PAB: 0.9
• PNAB: 4.5
• PS1: 1.3
• PS2: 0.8
• PS3: 1.3
• PW1: 9.5
• PW2: 1.8
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_359933

• Blastp: Aquaporin PIP2-1 from Arabidopsis with 82.35% of identity
• Blastx: Aquaporin PIP2-1 from Arabidopsis with 82.35% of identity
• Eggnog: Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity)(COG0580)
• Kegg: Link to kegg annotations (AT3G53420)
• CantataDB: Link to cantataDB annotations (CNT0000345)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441933.1)
• Pfam: Major intrinsic protein (PF00230.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;