Ll_transcript_358952

• Id Trinity: TRINITY_DN47676_c0_g1_i2
• Name Transcript: Ll_transcript_358952
• Sequence: CTCTTCTCTCTCTCATACCAATCTTTCTCTCTCTAGGGTTTCGTCGCTAACTCTCTCACACACACTGCTCATCACAATCGTAACACTCTTCCTCTCATTC ACTCACTATCGCTTCCTTCAATTTTCAGGCTAAAGGATTCTAGTTATTACAGAAAAAGAAGGGAAGTCGTGTGGTGTTGGGGTTTTATACCGTGGCGGAC GAATGCTGCTTGATGCTTGATGATAGTTGCAATGGACTTGAATGCCTCGCCAGTCCCGGAGGAAGAGGAAGATATTTTTGAGGGACATACTGTCGAAGAG TATTCTGCAACAGAAGAACGCGTGGAAAGTGGAGTTGATATAGCACGCCGGGAGCGTGAAGAAAGAAAGAGACGATTGAAGAGAGAACGTCCAGATGATA GGCCTGTGCATGTATCACAGTCACCTGGATATGATCAGTTGTTTCATACCAAGAGCCTTAAATCAAATGAGAGAAGCAGGCTTCCTCCAGGGTGGTTGGA TTGCCCTTCATTTGGTCAGGAGATTTGTTACATGGTACCTTCTAAGGTTCCACTTGGTGAATCATTCAATGACTGCATTTTACCTGGTAAAAGATACTCA TTTAAACAAGTGATACATCAACAGAGAGTTTTAGGGAGAAAACTTGGTCTTGTGATTGATTTAACAAATACTTCTCGATACTATCCTGTGTCAGATTTAA AGAAAGAGGGTATCAAACATGTTAAGATTCAATGCAAGGGGCGTGATTCTGTACCTGATAATTTAGCTGTGAATCAGTTTGTCTATGAGGTTACTCAATT TCTTGTACGTCAAAAACACTCGAAGAAGTATATTCTCGTTCATTGTACACACGGGCACAATCGTACTGGATATATGATCATCCATTATCTGATGCGTTCT ATGTCATTGTCTGTTACTCAGGCAATAAAAACATTTTCTGACGCACGCCCTCCAGGAATCTACAAACCTGATTACATTGATGGATTGTACACATTTTATC ATGAAAAGAAGCCTGAAATGGTAGTTTGTCCTCCTACTCCTGAGTGGAAGAGATCTTCTGAACTTGACCTCAATGGTGAAGCAGTTCCAGATGATGATGA TGATGGAATACCAGACCCTCAGTTGCAGGAGAACCATGAGACTGACACACGAATGACAAATGATGACGTTTTGGGAGATGAAATACCTATTGATCAACAA GAAGCATTCCGGCAGTTCTGTTATCAATCACTTAAATTGGGTGTTGGGGCCAGAGGACATGCACAATTTCCAGGTTCACATCCCGTTTCTCTTAACAGGG ATAATTTGCAGTTGCTACGACAGCGTTATTATTATGCGACATGGAAAGCTGATGGTACGCGATATATGATGCTTATAACTATGGATGGATGTTACTTAAT TGACAGAAATTTCAACTTTCGAAGGGTTCAAATGAGGTTTCCTTGCAGGAGTACAAGTGATGGTTTGGGCGAGAGAACCCATCACTTCACATTACTTGAT GGTGAGATGGTTATTGATACATTGCCAGATTCGCATAAGCAGGAGAGAAGATACCTTATATATGATATGATGGCAATCAACCAAGTATCCATAATAGAGC GACCCTTCTATGAACGGTGGAAAATGCTTGAGAAAGAAGTGATTGAACCTAGGAATCAGGAACGGCAGAATGGATACAAAAGCAAAAATCCTTACTATAG ATATGACCTGGAACCATTTAGGGTGAGGAGGAAAGATTTTTGGTTGCTCTCTACTGTCAATAAGCTTTTAACGGAATTCATTAAAAGACTCTCGCATGAG GCAGATGGTCTCATATTTCAGGGTTGGGATGATCCTTATGTACCTCGTACTCATGAAGGCCTTTTAAAGTGGAAATATGCAGAGCTGAATTCAGTTGATT TTCTCTTTGAGGTTGATGGTGATCGTCAGCTACTTTATATCTATGAACGAGGAAAAAAGAAACTCATGGAAGGGAATACGGTTGCATTCGGAGATGGTTC AGATCCCGCGCTTTATTCTGGGAAGATCATAGAGTGTTCTCGGAATCCTGATACACAGGAATGGGTATTCATGCGAGTCAGGACAGATAAATCTACTCCA AATGAGTTTAATACGTACAAGAAGGTCATCTACCAACACCTACTTTCTAGTTTTCATTATCTTTTTAATCTGTTCTTCATTACAACCATTTTCTTAATTT GCTGCAGGTGATGCGAAGTATAAGAGACAACATCACACAGGAAGATTTGTTGGATGAAATAAATGAGATAATT
• Tissue: pods
• Gene name: LI_gene_154574;
• Additional information: details;

Expression of Ll_transcript_358952

FPKM

• PAB: 0.3
• PNAB: 0.1
• PS1: 0.8
• PS2: 0.2
• PS3: 0.6
• PW1: 0.7
• PW2: 0.3
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_358952

• Blastp: mRNA-capping enzyme from Mus with 34.72% of identity
• Blastx: mRNA-capping enzyme from Homo with 35.41% of identity
• Eggnog: Second step of mRNA capping. Transfer of the GMP moiety of GTP to the 5'-end of RNA via an enzyme-GMP covalent reaction intermediate (By similarity)(COG5226)
• Kegg: Link to kegg annotations (24018)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434230.1)
• Pfam: Dual specificity phosphatase, catalytic domain (PF00782.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;