Id Trinity | TRINITY_DN47677_c1_g1_i4 |
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Name Transcript | Ll_transcript_360920 |
Sequence | CAACACAGTTCATCTCTTTTAACAAGTCCCAATGTCCTTATTCCTTTGCTCCTTAACAAATTAGAGACTTAACTTGAATCAAGTTTTGAACTGTGGGCCC CTCCTCCTTAGCCACCGGCTATGCTCACCCACATTGGCTCGTGCTTTCTTAAACCACCACCGCTCTCCGCCGCACCCATTTCACACTCCAGGTTTCAAAA TACTAAGCTTCTCAGAGTCAATTGCAGTTACTCCTCTTTTGAAGTTAGAGATGTTAGCTATCAACCACCAGGGACTCCGCTCAAGCTTCTGAATTCAGTT AGCTTTTCACTTCCAGACAAAAGTCTTGGGCTAATTTTTGGACAGAGTGGAAGTGGAAAAACAACTCTCTTGCAGCTTCTTGCAGGAATAAACAAGCCAA CCTCTGGATCCATTTGCACCCAAAAATATGGGAATGATGGAAATCCTAGTCAACCCCCAGAGCCCTTGGTGCCAGAAAGGGTTGGTATCGTCTTCCAGTT TCCGGAGAGGTATTTTGTGGCTGATAGTGTGCTTGATGAAGTCACTTTTGGGTGGCCTAGGCAAAAGGATAGCTATCAACTGAGGGAGAATCTTGCACAG GGGCTTCAGAGGGCAATTAACTGGGTTGGCTTAAGTGGGATACCGTTGGATAAAAATCCTCACTCCCTTAGTGGTGGTTACAAACGTCGTCTTGCCTTGG CAATACAATTAGTCCAAATCCCTGACCTATTGATATTAGATGAGCCTCTTGCTGGTCTTGATTGGAAAGCACGTGCCGATGTTGTGAAGCTTTTGATGAA TCTAAAAAAGGAATTAACTGTGCTGGTTGTCAGCCACGATTTGAGAGAGTTTAAAAGTCTAGTTGACCGATCATGGAGGATGGAAATGGGTGGCTACCTT AGAGAAGAGTTGCTACAATTTTAATCTGTACTCATTACCTTGTTTATCAGGAACAGATCTTGTTCCGTACATTGTCCCGCACCAAAAAATTTAGTTGACA TATCATATTTTTATTTATGTGAGATAATGTATGAGATAAGATCTGGTACCTCATATCTTTGTTATTAGCATGAAGTGCAATTAAGTTCGAGAGATATAAA CTGTTCATACCTACCACCTATTAAGCTTAAGCTTGTGGGATGTTTTTGATGTAGAATTGGAACTTGCAAAGAAATAATTTGAGGATGGCTTTGTTTGGAA GGGAAGGGAAGAGAGGGTTTTAAAAAGTTTTTCTTTTGTTTGGGAGTTAAGTGAAAGATACGGGATGGTTTTGAAGGTTTTTTAACACTCTTAATGTGTT TATTTTCATAGTTCCTTCAATTTGTGATTTTTGTAGTGACAAAATGTGAAAATATCTAAATGCAATTAGTAAAATTTTATAATTAAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_154580; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_360920
Blastp | ABC transporter I family member 11, chloroplastic from Arabidopsis with 74.27% of identity |
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Blastx | ABC transporter I family member 11, chloroplastic from Arabidopsis with 74.27% of identity |
Eggnog | ATPase activity(COG1122) |
Kegg | Link to kegg annotations (AT5G14100) |
CantataDB | Link to cantataDB annotations (CNT0001897) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019429672.1) |
Pfam | ABC transporter (PF00005.26) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |