| Id Trinity | TRINITY_DN47677_c2_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_360933 |
| Sequence | ATTTTACTCAAAGTTCATTCATCAAAAAATATAGTTGAGAGAGTCTGACATTGTATATGTTATAGTAATTCACTTTAACAGAACCATTCACATAATCTAA AGAGAGAAAGAAGATAGTTCTATTAGAATGGCATGCATAGAGAGAGCTTCCCCTGCTCTGAAGCAAATCCTTCTCAAATTTTACAGTGTTGAGAAGCCTA TGGAGATTGATCATCATTTGTATGAATTTGGATCAGTACAGTATCATATTCAGTCACAAGCCTCCAATCCACTGGTAGCTTACTTGTCAATATCAACACC ATCTCTTTGCCATGGAGTCCTACAAAATGAACTATCTTCTTACACAATTGAAACGGTAAAGAGACTATGTCCTGAAATTGTGGAGATTGTTGAACCTGCC AGAGAAGGATATCAACTTACTCTTAGGCTTAATCTCAATCAAATTCCACGAGGCAAAGATTATGTCAAAGTCATTCGAGATATTTCCACGGTTCAATCAG TAATTCTTAGTTCACAGCTGAAAGAAATATTATGGAATGTCAAGTCAAATGTTACGATGCAGGGGATGTACAAGCCCATCAAACTAGTCTACCATGCAAG AGAACCTTTCTTTATCATCATCGAGCCACAAAGAATCATAGCAGTATTCCCAATTCGTTTCAAAGAAAAGTCAGAGTTGATTATTGCAACAACTTTCTTT CAGGAGCTAATGGATGTTGGAAGTTCAGATAAATGGGCCAAGGCACCATCTTGTAACTGGTCAGCCATTCCTCCGCCAGAGTTAAGAGGAGAAACTTTGG AGGATTTGAGTACCAATGGAGGGTTTGTCACTTTTGATATCTCTTCTCGCCATATTGAAGGCAAAAGGCTAGACAAGACTGTCTGGAATCTATTAAATTT CAATGCCTATGTTAGATACCATGTAAAGGTAATTTCAATACTAATATTGCTTCTTAAAGATTATTTCTAATTGTAAATCACTATTTTGGACCTCTTTAAC TGACATCTACATTGCAGAGCACCAAAGGTTATATTCAAAGAAGGATGAGAAAACGTTTAGAAAATTTGGTTCAGGTATAGAAACACCTAAGTGCAACATC AAGTTCATTGTTAAGACAAAATTTGGTTTAGGGAAGCATTAAGATTTGATCTGAACTATGGGATGTAAATGACACCCATTTCATGCACAAATCTTGAAGA GTAGCTACCATAAGTTATTTCCAATGCCAGAAACTATACTATTGGGTATTGGCATTACAGACAAGCATTCACCATAAATGGTTAAACAAAGCAAATGAAC AAACCAAACAACATCAAGGTCTGCTTTCTCCTAACACATTCAATATTGTAGACAATACCATTGACAGATTAAGGACAAAACTTGTTCCAGAAATATCCCT TATACGTTTATGCTAGTAAACTCCACACACACACAAGTGCTTTAGCATACACTTATAATCTCATATTAAGGACAGCATCACATGATGTAAATGCAATATT GTGGTTGCGGTGACCGCCGCAACTGTATCACACAACAATGATACAGTCACATCGAGTCGCACTGTAATTGCATCAAACCATATTTTGGTTGTGTCAGACT ATATTGAATTCAAAAGTATTTTTTTAGTTATAAGATAATTCATATCACAATAGTCGCCATCCACATCGCAACTGCTACAACAATCGTGGTCATAACCGTA ATTGCAATCGCGATTCATAATCATAACCGCAATTTAAAACACTGAATATAGATGAAATCAAATAAATGTGAGAAAACCAGAAACATTCATTGCTCACTTT CGATGTCTTTTCAGCAGCAGGATATCGACATGCAAAGAAACAATTAAGATCCTCCAAATATAACATCATGAAACAAAGATGGGGCAACTTTGGCAGAAAA ATAAAGACGCATTTCAGGCTTAGAATTCACGGATTTGGAAGATTTCGACAAAGATGGTTGAGGTTCCCAAAATTTTCTTCAAAAGGATATGCAAAGTTAG AATAGATCATTTGTTGTTTACCATTTTACTTATGTAATATATGGCTTCAACTAAATGAGCTAAATCTTGAATGACTTCACTACTATCTCAAGAGTCTAAT TATATGCTATCTCATTTTCAGCCACTTGATTGTAAACAATAGAGTATTCATTTTTCTTGACATTTACCAAAATTGTGATGGTAGTAATGTGCTGAATGTA ATGAAGTTTATTACAGAAATATTCCACAAAAGATGGGGATATCCCAGAAAGAGAGATTCCACCAAAATGTTTGTTTCACTTGACGATTCAAATAGAAAAG TATATGAATGAAAAGTGAAGTGCTACAACAGGTCTTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_154582; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_360933
| Blastp | Actin-related protein 2/3 complex subunit 2B from Arabidopsis with 53.9% of identity |
|---|---|
| Blastx | Actin-related protein 2/3 complex subunit 2B from Arabidopsis with 53.9% of identity |
| Eggnog | protein 2 3 complex subunit(ENOG410YKF6) |
| Kegg | Link to kegg annotations (AT2G33385) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429504.1) |
| Pfam | Arp2/3 complex, 34 kD subunit p34-Arc (PF04045.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |