Ll_transcript_360390

• Id Trinity: TRINITY_DN47684_c3_g2_i4
• Name Transcript: Ll_transcript_360390
• Sequence: ATTTTTATTTCCTCTGAAAAGAACGCGCTAGAAGCAAAAAACACTCCAAATCAGAAAAGGGAAATAATCGTGTGGAACTTGCGCGGGATGCGATTTGCGT GGTGGCGGTGCTCACCAGGGTCCAATGCACCGAATCACGCGGCGGCGGAAGTTTGTTGTTCCCGTCGTCGCCACCGTTGATGGCCTTGCAGATGACGTGG CAGCCGAGCCTCCTCAGTGATAAACGCAAAACCGGTCCTCCGTTAGGGCTCAGAAATCTCGGCAACTCTTGTTATCTCAATTCCGTTCTTCAGTGCCTCA CATATACTCCTCCTCTCGCTAATTTCTGCCTCCGATTTCAACATTCTTCTCTCTGTGATTCTGCTGCTGCATCTTCTTGCCCCTTCTGCATACTCGAGAA ACAAATTGCACGCTCCCTGCGCGTGGACCTCACGCACGACGCCCCTTCAAAGATCCAGAACTGTCTTCGGATATTCGCCGAGCACTTTCGCTGTGGCCGC CAGGAGGACGCTCATGAGTTCCTCCGTTACGTGATTGATGCGTGTCACAACACCTGCCTCCGACTCAAGAAGCTCCGCCGCAAAGGCGGTGTTGGTGATG GTGTTGGTGGTAGTGGTGGTGGAGGGAGCTCGGTTGTGAAGGAAATTTTTGGAGGAGCGTTGCAGAGTCAGGTGAAGTGTTTGAATTGTGGATATGAGTC AAATAAGGCTGATGAGATAATGGATATTAGTCTTGATGTTTTCCATAGTAGTTCGCTTAGAGACTCCATGCAAAAATTCTTTCAGGCTGAAGTTTTAGAT GGCAACAATAAGTATAAGTGTGATAGTTGTAAAAAGTTGGTTGCTGCTAAAAAGCAGATGAGTATACTTCAAGCGCCTAATATCCTTGTGATACAACTCA AGAGATTTGAGGGCATATTGGGTGGTAAGATTGATAAGGCTGTTGCATTTGAAGAATTTTTGGTGCTTTCTAGCTTCATGTGCAAAGCAAGCCAGGATCC ACTACCTGAATATAAGCTCTTTGGTACTATTGTGCATTCTGGCTACTCCCCAGAATCTGGTCATTATTATGCTTATATAAAGGATGCAATGGGTCGGTGG TATTGCTGCAACGATTCTTGTGTAACACTTGCAACACTGCAAGAAGTCTTGTCTGAAAAGGTTTATATCCTTTTTTTCTCTCGAACTAACCAAAGGCCAG CGCCAATTAATAAGTCTCCTGCTTCAAATGGTGGAAAGTCTCATCATTCCAATGGGAGTCAGGCATCTGACAGCCCAAAGGTTGATGTACCACCGAAAGC AGTGCGTGCAAAATCAAATTCTGAGCAATCTCAACGGAAGGATATGCCAAGCATATCTAAGATTGGTAAAGTTCCTTCCAGCCCACGAGTGAAGTTTGAC ATCAATGGAAATTCTAGTTCCAAAAGAGTTCTTGCTTCTGCAAGTGTGAACGGGAAAGATGTTGTTTCTAAGAATCAGTCATTAGCAATAAATGGGCATG CTAAAGTGTCAATTTCTTTGGAGAATGGTAAGAATGATTCTTCTTCACTACCAACCCGGAATGGCTTTGAGAAAAATAAAGTTGATGTTGCTGACAACTC GAAAAGAAAGGAGGCAGTGTTAACAAATGGACACACTGATATTCAAAAAGTTGATATCCATTCTGTAAAAGCAAATCCCATGGAGGACGCTGATAGAAGC AGGGTAACAATGGTTAGAGGGCCTGACACCTTTAAGCAAGAAATCAATGGCCTCCGCAACAAACCTAAAATATTGGGGAATAAGAGAGAAATACAGGAGG CTCCGTGCATTTTGCTCGCACAAGACGTTCAATCTAGAACAAGAGTTGAAGAACTAAAGAACATTCTTGGGATAGAGGCAAAGTCAGTTTTGATGTCATG TGGCTGGACAGATATGGTCTATGACTTCATGCGTTCTAGAAAGAGGCTGTGCACACAAGAAGCTGGAAATTTAACCACTGGAGATGAAGCAAGGAAGTCG TTAATAGGAGATGCAAAGTGTGCTTTGTTATCCAAGATTCCCGAGTCTTTGAGAAAGGATATGATCGAACGTCTCCGATTGTTTAGCGAAGAAAAAAGTA CAATTTGAAGAACCTTGATCAGAACATGCATTTTGATCTGTCTTGCTAGTGAGAGGCTTGGTGTGTATAGTCTGTATTTCTAGTTACTGTAGTGATGGTG GTACCCGTACTGGGATGCTCAGTTTGGTTTTGTTACATACTGACTCTTCGAGCTAGCGTCGTCAAAAGCAGGAGAATGTGGAGATTGTCTTCCTCGCAGT GGCGGCTTTGTTACGCATCTAGTTCCCAATTTCGATATAGAAGTTCAGATTCCATGTCTTGCCATTAGAGAGCGTATGAGGAATTCTTTTCATTTTGTAC AATATCTTTTTTTAGTATTGTATTAGAGAGCAAAATCTTTCTATAAAATTGCTCAACAAATTTTGCATTGAAGATGTGGCTGTGTATGATTTGTGGATAC ATGCTACATAAAATATGACCTTAAACTTTCTGGTATTACTATAAAACATGAAATGCATTCTGAACGCTGTGTGGTGGTTTTGATATGCGCTGCTTAATGA AAGAATTGGGTGCTATGCAATGTCATATGGTAAGAGTATGTACCCAGTTTTAGTGTCACTAGCCATATTTTCTGTCCCAAACTTTGTATTATTTTATGT
• Tissue: pods
• Gene name: LI_gene_154614;
• Additional information: details;

Expression of Ll_transcript_360390

FPKM

• PAB: 10.1
• PNAB: 10.5
• PS1: 12.5
• PS2: 11.7
• PS3: 12.5
• PW1: 9.5
• PW2: 11.9
• PW3: 12.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_360390

• Blastp: Ubiquitin carboxyl-terminal hydrolase 25 from Arabidopsis with 51.62% of identity
• Blastx: Ubiquitin carboxyl-terminal hydrolase 25 from Arabidopsis with 51.62% of identity
• Eggnog: ubiquitin carboxyl-terminal hydrolase(ENOG410XQ92)
• Kegg: Link to kegg annotations (AT3G14400)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456425.1)
• Pfam: Ubiquitin carboxyl-terminal hydrolase (PF13423.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;