Ll_transcript_358930

Id TrinityTRINITY_DN47686_c0_g1_i10
Name TranscriptLl_transcript_358930
SequenceGAGGCTATTGGAGCTGAATATGGAGAAGGGTTTGAGACTTTCAGGACAGATGGACCCTTAAAAGTTGATGTGGTAAGCAATTTAGTCACCATGGACTTTT TCTGAAGCAAGTTTGTACTATGATTTATGATGTAAAGGATACCGATTTTTATTGAAAATAGGACTACTTGAATGATAAATTGCAAGAAGGTTTTCTTAAA CGCATACGCTATGCTATGAAGCCAGATGAAGCTTACGGTCTTATCTTCTCTTGGGATAATGTGGTTGTGAGTTAGCTTTCTTGACTCAAGTTTGTATGTA TATTTGCTTTTACCTATGATATATAGCCGTCTTTGCTGTATTATTTAGCTATGTTTTCGAAATTTGAAGTGATGTAAATTTAGTTTATGGTATTTATTAT GATCATATAGATTATAGAATATGCATATTGTTTTGATTGTTAACAACTTGTCGGCCTAGCTACTACGATCGAAAAGTCTTGAAAAGAGAAGAGGGTGGTC ATACATAATATGCAGATTTCAGTTTGAATTAACGTGTGATTTGTGTCAGGCTGATACTCGAGTTCTGAAGAGGAAGGCATGGAAACAACTGGCCTCGGAA GAGGGAAAAGATATTCCCGAAGATGGTGATATACAAAGATTAATGCTTTACGGAGGTGCTGATCAGGTGTTGCGTAAGCATTTTCTCTCGGATAAGGCAG AAAGTGAGTTGGATAGACTAAAGTCGAGGTTCTCTCAATTATATCACGATAATCTTCTAAAACTTGAAAGACCGAAGGAAGGCCTCAAGGACTGGTTGGA AGCGGTTAATACCGCTCGTATCCCCTGTGCCGTTGTTTCAAGTCTCGATAGAAGAAATATGGTAGAAGCTTTGGAGGTATTGGGGCTCAGTAACTACTTC CAGGCAATTGTGACAGAAGAGGATGGAATGGAGTCAATAGCTCATAGATTTCTTTCTGCCGCCGTCAAGCTGGATCGGAAACCTTCCAAGTGTGTGGTTT TTGAAGATGATCCTAGAGGAGTAACTGCTGCACACAATTGTACAATGATGGCTGTAGCACTAATTGGAGCTTATCCGGCGTGAGTAATTCACATTTATGA TGTTCTTGATGGATAAAGTTTCATATAGTTAATATACAATGTATAATTTGGTCCCGGAAAGTGACTACTTGTGTTGCTTTCGTCCTTGAAAATATGCATC TAAGCAAATTCGTCCTCGAAATTGACATCTAATGCCAAACACGCACATGTAATGTTAATTGCTAACTGGAGTGTCAACGTTAAGTGTACTCGTGTCGCGT CAGCTAGTTTTAGCTTTTGAGTACATTTTCCTTGAAGATATCCAACTATCATTCATTCCTATATGCCATGATCATTTCAAGAATTATGATATCCGTTAAT CGATAGATAATTCGTTGTTATGCTAGTCAAATAGGTTATATCTGCGGCTTTGTGCACTTACCATTATGTGTTAGCATCTTCGTTACGTGTCGACTCGTAC TTTCGGGGCTACAGCAACACAAGTCAAATAGTCACTTTCAGGGATCAAATATATTTAACCCAATTCATGAACATACACATTGAAACCAGTAGTTTCATGT GTAGTAGTTCCAATATGTGAGGGCATGCATGTATCCAATTTAGTGATTGAATGTGCAAACACTGTTTCCAACATACACAAACGCATTGAATTCAGTAGTC TCATTTGATGAGGTTTTGAGCCAGCTTTCAAGGGCTAACATCAATCCACCATAATTCTCTCCCATCGAATCGATACAGTAATTCCGTTCGGTTGCACACT TTTAGTACTAGGCTGCTTTTCATGAGATTATTCTCTCGCATTCAGAAAATGATTAAGAAGGTTAGTTCGGCGCAACAGTAAGGTTATTGCCTAGTAACCG TGAGGTCACAGGTTCAAATCCTAGAAACAGCCTCTCCGCTAGCAGAGGTAAGGCTGCATACGTTTCGCTCGCCGAGACCCCATTAAGTGATAGTCTTATG TACTTGGCCGTCCTTTTTTTCCGGAGAAAATGATTATTGTTTGAAATTTGCAGGTATGATTTGGAACAGGCTGATCTTGCTGTTGCTAACTTCAGTGAAC TTTCTGTGATAAACTTGAGAAGACTATTTGCAAACAAAGGTTCTACATTTATGGACCTGCAGAAGCAGATCATAGAGAAAACTCCTCCAAAGAGGAAACT TACAATAGACACTATTTTCTAATATCCTTCAATTCTTATCTTTGGTCTTTTATAATTTTCCTTGTAATTAAATAATTCATTAGCCTTAGTTTTATTATAA ATGTCAAATAAAAATGCAATCAGTTTGGTCTGATGTAATCATATTTTCCAATATCAATTTTTGACTTCTAATTTTGCCATATTTTCA BLAST
Tissuepods
Gene nameLI_gene_154623; 
Additional informationdetails; 

Expression of Ll_transcript_358930

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_358930

Blastp5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic from Arabidopsis with 26.36% of identity
Blastx5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic from Arabidopsis with 24.38% of identity
EggnogHAD-superfamily hydrolase subfamily IA variant 3(COG0637)
KeggLink to kegg annotations (AT4G11570)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019437593.1)
PfamHaloacid dehalogenase-like hydrolase (PF13419.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;