Ll_transcript_358930

• Id Trinity: TRINITY_DN47686_c0_g1_i10
• Name Transcript: Ll_transcript_358930
• Sequence: GAGGCTATTGGAGCTGAATATGGAGAAGGGTTTGAGACTTTCAGGACAGATGGACCCTTAAAAGTTGATGTGGTAAGCAATTTAGTCACCATGGACTTTT TCTGAAGCAAGTTTGTACTATGATTTATGATGTAAAGGATACCGATTTTTATTGAAAATAGGACTACTTGAATGATAAATTGCAAGAAGGTTTTCTTAAA CGCATACGCTATGCTATGAAGCCAGATGAAGCTTACGGTCTTATCTTCTCTTGGGATAATGTGGTTGTGAGTTAGCTTTCTTGACTCAAGTTTGTATGTA TATTTGCTTTTACCTATGATATATAGCCGTCTTTGCTGTATTATTTAGCTATGTTTTCGAAATTTGAAGTGATGTAAATTTAGTTTATGGTATTTATTAT GATCATATAGATTATAGAATATGCATATTGTTTTGATTGTTAACAACTTGTCGGCCTAGCTACTACGATCGAAAAGTCTTGAAAAGAGAAGAGGGTGGTC ATACATAATATGCAGATTTCAGTTTGAATTAACGTGTGATTTGTGTCAGGCTGATACTCGAGTTCTGAAGAGGAAGGCATGGAAACAACTGGCCTCGGAA GAGGGAAAAGATATTCCCGAAGATGGTGATATACAAAGATTAATGCTTTACGGAGGTGCTGATCAGGTGTTGCGTAAGCATTTTCTCTCGGATAAGGCAG AAAGTGAGTTGGATAGACTAAAGTCGAGGTTCTCTCAATTATATCACGATAATCTTCTAAAACTTGAAAGACCGAAGGAAGGCCTCAAGGACTGGTTGGA AGCGGTTAATACCGCTCGTATCCCCTGTGCCGTTGTTTCAAGTCTCGATAGAAGAAATATGGTAGAAGCTTTGGAGGTATTGGGGCTCAGTAACTACTTC CAGGCAATTGTGACAGAAGAGGATGGAATGGAGTCAATAGCTCATAGATTTCTTTCTGCCGCCGTCAAGCTGGATCGGAAACCTTCCAAGTGTGTGGTTT TTGAAGATGATCCTAGAGGAGTAACTGCTGCACACAATTGTACAATGATGGCTGTAGCACTAATTGGAGCTTATCCGGCGTGAGTAATTCACATTTATGA TGTTCTTGATGGATAAAGTTTCATATAGTTAATATACAATGTATAATTTGGTCCCGGAAAGTGACTACTTGTGTTGCTTTCGTCCTTGAAAATATGCATC TAAGCAAATTCGTCCTCGAAATTGACATCTAATGCCAAACACGCACATGTAATGTTAATTGCTAACTGGAGTGTCAACGTTAAGTGTACTCGTGTCGCGT CAGCTAGTTTTAGCTTTTGAGTACATTTTCCTTGAAGATATCCAACTATCATTCATTCCTATATGCCATGATCATTTCAAGAATTATGATATCCGTTAAT CGATAGATAATTCGTTGTTATGCTAGTCAAATAGGTTATATCTGCGGCTTTGTGCACTTACCATTATGTGTTAGCATCTTCGTTACGTGTCGACTCGTAC TTTCGGGGCTACAGCAACACAAGTCAAATAGTCACTTTCAGGGATCAAATATATTTAACCCAATTCATGAACATACACATTGAAACCAGTAGTTTCATGT GTAGTAGTTCCAATATGTGAGGGCATGCATGTATCCAATTTAGTGATTGAATGTGCAAACACTGTTTCCAACATACACAAACGCATTGAATTCAGTAGTC TCATTTGATGAGGTTTTGAGCCAGCTTTCAAGGGCTAACATCAATCCACCATAATTCTCTCCCATCGAATCGATACAGTAATTCCGTTCGGTTGCACACT TTTAGTACTAGGCTGCTTTTCATGAGATTATTCTCTCGCATTCAGAAAATGATTAAGAAGGTTAGTTCGGCGCAACAGTAAGGTTATTGCCTAGTAACCG TGAGGTCACAGGTTCAAATCCTAGAAACAGCCTCTCCGCTAGCAGAGGTAAGGCTGCATACGTTTCGCTCGCCGAGACCCCATTAAGTGATAGTCTTATG TACTTGGCCGTCCTTTTTTTCCGGAGAAAATGATTATTGTTTGAAATTTGCAGGTATGATTTGGAACAGGCTGATCTTGCTGTTGCTAACTTCAGTGAAC TTTCTGTGATAAACTTGAGAAGACTATTTGCAAACAAAGGTTCTACATTTATGGACCTGCAGAAGCAGATCATAGAGAAAACTCCTCCAAAGAGGAAACT TACAATAGACACTATTTTCTAATATCCTTCAATTCTTATCTTTGGTCTTTTATAATTTTCCTTGTAATTAAATAATTCATTAGCCTTAGTTTTATTATAA ATGTCAAATAAAAATGCAATCAGTTTGGTCTGATGTAATCATATTTTCCAATATCAATTTTTGACTTCTAATTTTGCCATATTTTCA
• Tissue: pods
• Gene name: LI_gene_154623;
• Additional information: details;

Expression of Ll_transcript_358930

FPKM

• PAB: 0.2
• PNAB: 0.3
• PS1: 0
• PS2: 0.9
• PS3: 0.6
• PW1: 0
• PW2: 0
• PW3: 0.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_358930

• Blastp: 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic from Arabidopsis with 26.36% of identity
• Blastx: 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic from Arabidopsis with 24.38% of identity
• Eggnog: HAD-superfamily hydrolase subfamily IA variant 3(COG0637)
• Kegg: Link to kegg annotations (AT4G11570)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437593.1)
• Pfam: Haloacid dehalogenase-like hydrolase (PF13419.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;