Ll_transcript_374127

• Id Trinity: TRINITY_DN47700_c2_g3_i12
• Name Transcript: Ll_transcript_374127
• Sequence: GAAAATTCCATAAAATTAGAACATATCACTCTTTCTTCTTCAAACACTGAACATTCAATTTCATGTTTCACACTATCGTACTTTTTGTGAATTAGGGTTT TCAATTTTTCTGAATTTCATAATATGAAGAATCAAATTCACAATCTCAAGCGCTGCAACCCTCATCAACAAAACAACACACTTCAGAAGAAGCAAAAGAT GACCCACTTCAGCGACACAAGTAATTCAAATTCCCAAGATTTTACTCAACCTCAATTGTTGCGTTCTTCACGAGGTCGACGCAGGATTCTACCTTCCAGG TTCAATGATTCAGTTCTTCATACATTGAATTTCAATTCAAGTTTGAAAATTGATGATAATAATTTAGAACAAGGGAATTCAGATGAATGTAGCTCCAAAA ATTCAGCTGTGTTTTCGTATTCTGATGAAAAATTGAAGGATGAGTCAGAATTGGTTGGGTTTAAGAAGCATGGTGGCATTAAAACGACGCTTAATCGGAA TCGTTTGTCATTGGTGAAAACGGATAGTTCAATATCAGGGATTGGTTTTCAGGGTTTAGATCAAAAGGGTAATCATGGAAATGAAAAAAAGAGTAAGGAG ATTTATAAATTGGAGGATTTTGCTTTGGGTGATATTGTTTGGGCAAAATGTGGGAAGCGATATCCGGCTTGGCCTGCTGTGGTCATTGATCCACTCTTGC AAGCTCCCAAATCCGTCTTGAATTGCTGTGTTCCTGGTGCAATCTGTGTTATGTTTTTCGGTTATTCGAAGAACGGAAAGCAAAGGGACTATGCATGGGC GAAGCAGGGAATGATATTCCCATTCTTGGAATTCATGGATAGATTCCAGGGACAGACCCAATTGCACAAGAGCAAACCAAGTGACTTTCATGTGGCAATA GAGGAGGCAATTTTGACAGAAGATGGCATCTTGGACCTGCACTTTGGAGCTAAGCAAATTATGAATGTTGAAGCTCATCCCAGTGGCCTTATGGAGGGTA CAGGATCCTTTGTTGACCAGAAGTGTTATGACCAACACCAGAACACTACATCTTGTGCTAGCTGTGGTTTGATGTTGCCGTGCAAAACCGTGAAGAGGAA TAAGGATTCAAGTTGCCAACCTCAACCTTACTGTAAATATTGTGCAAAGTTACAAAAATCAAAACAATATTGTGGCATTTGCAAAAAGATTTGGCACCAT TCAGATGGAGGGGACTGGGTATGCTGTGATGGTTGTAATGTTTGGGTGCATGTTGAGTGCGACAATATTTCCAGCAAACTTTTCAAGGATATGGAAAATA TAGATTACTTTTGTCCAGATTGCAAGGGAAAGTTTAACTGTAAATTATCAGAAACACAAACATCCAATTCAAAAATTAAATCAATAGAGAATAGCCAGAT GCAGACACCTATGATACCTGAAAAGCTAGCGGTAGTGTGCAATGGCATGGAAGGAATTTACATTCCAAAGCTTCATTTAGTTATGTGTAAGTGTGAATTC TGTGGATCAAGGAAGCAGAAACTGACTGATTGGGAACGACATACAGGTTGCAAAGCAAAAAAATGGAAATATAGCGTGAAAGTGGAAAGCACAATGCAAC CGCTAATAAATTGGATCAGAGAACACAATTTACAAGCTGGAACTTGCCTGCAGTTAGATCAGGAGCAGGTGATTTCCTTTTTGCAAGAGAAGTATGAGCC AGTTTATGTAAAATGGACGACAGAAAGATGTGCCATTTGCAGATGGGTTGATGATTGGGAAGATAACAAAATTATCATCTGTAACAGGTGCCAAATTGCT GTCCATCAAGAATGCTATGGAGCAAAGAATGTTCACGATTTTACTTCTTGGGTTTGTAGAGTCTGTGAAACTCCTGATGTTGAGAGAGATTGTTGCCTCT GTCCAGTAAAAGGTGGTGCTCTAAAGCCAACTGATATCGAGATGTTGTGGGTTCATGTAACATGCGCTTGGTTTCGGCCTGAAGTTCTTTTCCAAAACCA CGAGGCTATGGAACCTGCCTCTGGAATCCTTATAATACCTCCTGATTCCTTTTCGAAGACTTGTGTCATCTGCAAACAAAGGCATGGTTCCTGTATAAGT TGTTGCAAGTGCGCTACATATTTTCATGTGATGTGTGCTTCAAGAATGGGATACAGCATGGAAATGCATTCTACAGAGAATAATGGGACTCAACAATCAA AGATGCTAATGTATTGTGCATTTCACAGGGCCCCAAAGCCAGATTCAGTACTGGTTGTACATACACCCCTAGGGGTATTCTCTCCCAACAATTCATTTCA AAATCACAAGGGATGCTTCAGGGGGTCAAGGCTGGTTTCATCAAAGAATGTAGAACTCCCTGAATCTCAAACCTCTAAAAGTCTTGAGGTTGAGCCACTT TCTGCTGCCAGGTGTTGTGTGTACAGAAAGTCTCTCAATAAGAGGGATGATGTTCCAATAATTCACTTGCTGGGGGGATCAAACCTTCATTCTTTAAGAG CAATAAGTCAATTGAACAGCCATAATAATAAGGCTGCTGAAGAATTTTCTTCTTTAAAGGAGCGTCTTTGCCATTTACAGAAAACGGAAAAACGCAGACT TTGCTTTGGAAAGTCGGGTATTAATGGATGGGGCCTCTTTGCTCGCAGAGATATACAAGAAGGAGAAATGGTTGTTGAGTATCGTGGTGAGCAGGTAAGG CGTAGTGTTGCTGATCGGAGGGAAGCAATGTACCGTTCCGAAGGCAAAGCTTGTTATTTGTTCAAGATTAGCGAGGAAGTGGTAATCGACGCAACAGACA AGGGCAATATTGCAAGATTGATAAACCATTCTTGCATGCCAAATTGCTATGCAAGAATTATGTGTTTGGGTGATCAGGAAAGCCGGATCGTTCTCATTGC CAAGGCCAATGTTTCTGCCGGTGAAGAACTCACGTATGATTACTTGTTCGATCCAGATGAGCGGGATGAACTGAAAGTTCCTTGTCTGTGTAGAGCCCCC AACTGCAGAAAATTTATGAACTAGGTTTCACATAATCCATTCAGCTTGTACTCTATATTTGTTCTTCTTCTTAAGTTGAATATATTTTGTCGGATAAAGG CTTGGTTGCTATAAGTTCGATATAATTTGTATATCGTTTGTACAATTTAAAGGAAAATTTGGCAGCCAAAGGGTTCCTATAAGAGGATCCAGAATTGAAA GAGGAGATACCAATTGGTGGCAACTAGCTATTAATTATTTCAATTTATTTGTTTGAATAATGTAAAGACTAGATTTATGAAATGAATGAGATTGAATATA TAAATGAGGAACAATACTAACTCATTTTACATTGAGATATCAATATTTG
• Tissue: pods
• Gene name: LI_gene_154726;
• Additional information: details;

Expression of Ll_transcript_374127

FPKM

• PAB: 1.2
• PNAB: 4.5
• PS1: 4.3
• PS2: 3.8
• PS3: 6
• PW1: 2
• PW2: 1.6
• PW3: 0.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_374127

• Blastp: Histone-lysine N-methyltransferase ATX3 from Arabidopsis with 55.18% of identity
• Blastx: Histone-lysine N-methyltransferase ATX3 from Arabidopsis with 58.63% of identity
• Eggnog: Histone-lysine N-methyltransferase(COG2940)
• Kegg: Link to kegg annotations (AT3G61740)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440442.1)
• Pfam: PWWP domain (PF00855.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;