Id Trinity | TRINITY_DN47700_c2_g3_i2 |
---|---|
Name Transcript | Ll_transcript_374102 |
Sequence | TGTGTTATCACAGACACATATAAAAAGCTTCTCCTTTTTTTTGTTTTCCTATCGCTCAATTCAAATCGTTCCTTTTTCATAAAAATTCTCACTCCGTTTT TTCTTCTTCCGTTTCTTGTTCTTCGTTCCGGAGATCGAAATCATCGTTTCAATCTCTCTTTGATTCTTTCCCTTCTTCTTAATTTTCCCTCTACATTCGC AAAAGAGAAAAATCCCTCAAAATCTTTACGTTTCAACCGTTAATTCCATCATTGTTCGATTCTGGGGGTTTTTGCTTCTAAATTCAACGTGGTTCGTGTT GATTTCGGGGTTCTCCAAACAGTGCGGGGTTCAAACGTTGTGGTAGGTATAGCGCGTGCCTTGAAGGTTCGGTCGTTAATTATTCAATTCGTATTGGCCA CGATTCGAAATTAGGGTTTTAAGGTGATTCGTTTGAGGCACGATCTTAGTATTGGGATGGTTACAACATGATATTTAATCAGACAAGGACAATTGAAATG CCGAAATTGAAACGTTGTGATCTGGATGGGGCGAACTGTGACGGGCATGAATATTCAGCGATTCAGAAGAAGCGTAAGGGGAATGGGTTTTACTCTTTAG CTAAGCCATGTGATGATGAAGATTTCAGTAGCGGTTCTGGCTCTTGGTGCAGTGAAGGGTCCTACTGGGATGGTAGTGGTAGTGGTGCTGAGGTTCAGTC CAATTCAAACTCAATTTCAAAGCAGTTCCATGGTAAAACAGCTAGCCGACCTCCATTGCTGCGGTCTTCGCGTGGCCGTGTTCAGACGCTGCCATCAAGG TTCAGTGACTCGGTTCTTGATACATGGAGGGATCAAGGAAATAAAATGGAGGGCATAGGTTACTGCGATGAAGATGGTAATAACAATAGTTTAGTGGAAG ATAGGGCGAGCATTAGTGACTGGGATAACTATGGTTTGGAAAATTTTCAATGTTGTTCTGGAGTGAAGGTTAGAATGGAAATAGATGACGAAAGGGAGCA TGCTAATTCGTCTAGTATTGGTAAAAGGAGTAATACATCTGGACTTAGTTTTGAGGCTGTTGATCAAGTCCCTAATGGGAAAGGTGGAAAGGGGAAAGAG ATTTACAAACCAGAGGATTTTGCACTAGGTGATATAGTTTGGGCAAAATGTGGGAAGAGATATCCGGCCTGGCCTGCTGTAGTGATTGATCCTCTCTCTC AGGCTCCCAAAGCTGTGCTCAGCTGTTGTGTTCCTGGTGCACTCTGTGTCATGTTTTTCGGTTACTCGAAAAATGGAAAGCAAAGGGATTATGCGTGGGT AAAGCAGGGAATGATGTTCCCATTCTTGAAATTCATGGAAAGATTTCAGGGGCAGACCCAGTTGTACAAGAGCAAACCAAGTGATTTTCACATGGCATTG GAGGAGGCAATGTTGGCGCAAGATGGCCTTCTGGACTCACAATTGGGAGTAGAGGAAGTAACTAATGTAAAAGCTCATTCAGATGGACTTAAACAGGCCA CAAGTTCATATGTTGATCATGAATGTTACTATCAGGGTCAGGATGCAAGATCTTGTGCTGGCTGTGGTTTGATGTCACCATGCAAAACAATGAAGAAGCT TAAGGATTCAAGTTGTGAACCTCAACTTTATTGCAAACATTGTGCAAAGTTACGAAAATCAAAACAATATTGTGGTATTTGCAAAAGGATATGGCACCAT TCAGATGGTGGGAATTGGGTATGCTGTGATGGTTGTAACGTCTGGGTGCATGCTGAGTGTGCAAAAATTTCCAGCAAAAATTTCAAGGATTTGGAAAATA TAGATTACTATTGCCCAGATTGCAAGGGAAAAATCAATTATAAATCACCGGCACCGCAGACATATAATTCAGAAATCAAATCAATGAAGAGTAGTCAAAA ACCTGTGATACCTGAGAAGGTAATGGTGGTGTGCAATGGCATGGAAGGAACTTACATCCCAAAGCTTCATTTGGTTATGTGCAACTGTGGCTCTTGTGGT TCACGGAAGCAGACCCTGAGTGAATGGGAAAAGCATACAGGTTGCAGAGCCAAAAAATGGAAACATAGTGTGAAAGTAAAAAGCACAATGCTACCACTTG AAAAATGGATCACAGAACACATTTCAGAAGATGGAGTTCCCCCCCTGCAGCTAGATCAGCAGCAAGTGCTTGCCTTTTTGCAAGAGAAGTATGAGCCAGT TCATGCAAAATGGACAACAGAAAGATGTGCCATTTGCAGATGGGTTGAAGATTGGGAGGACAACAAAATGATTATTTGTAACAGGTGCCAAATAGCAGTC CACCAAGAATGCTATGGGGTAAAGAATGTTCAGGATTTTGCTTCTTGGGTTTGTAGAGTATGTGAAACTCCTGATGTTGAAAGAGAGTGTTGCCTCTGCC CAGTTAAAGGTGGTGCTTTAAAGCCAACTGATGTCGAGATGCTGTGGGTTCATGTTACTTGTGCTTGGTTTAAACCCGAGGTTGTTTTCCAAAACCATGA GACCATGGAACCTGCCTTAGGAATCCTTAGAATTCCTCCAAATACCTTTGTCAAGACTTGCGTGATCTGTAAACAAAACCATGGTTCCTGTGCAAGTTGT GTCAAGTGTGCTACTCATTTTCATGTGATATGTGCTGCAAGAGCAGGATATAGCATGGAATTGCATTCAATAGAGAAGAATGGGAGTCAAATAATAAAGA AGCTAATATACTGTGCAGTTCACAGATTCAGTACTGGTTATGCATACACCCATGGGGGTTTTCTCTCCCAGGACTTCATTTCAAAATCATAAGGGATGCT TAAGGGGATCAAGGCTGGTTTCATCAAAGAATGCTGACCTTAATGAATTTCCAACCTCTGAAACTGACATGGTTGAGCAACTTTTCACTGCTCGTTGTCG TGTGTATCGAAGGTCTCCTAACAAGAGGGCTAATGTACCAATAATTCACTTGCTGAGGGGACCCAGTCTTCATTCCTTAAGTGCTGTAATTCAATTGAAC AACTATAAGAGTGGTGAAGATTCCGAAGTATTTACTTTCAAAGAACGTCTTCATCATTTACAGAAGAAGGAAAAGCATATCATTTGCTTTGGAAAATCCG GTATTCATGGATGGGGTCTCTTTGCTCGAAGAGATATACAAGAAGGAGAGATGGTTGTTGAATATCGTGGTGAGCAGGTTAGGCGTAGTGTTGCTGATCT GAGGGAAGCAAAATACCGTTTAGAAGGCAAAGATTGCTATTTGTTCAAGATCAGCGAGGAAGTGGTAATCGACGCAACTCACAAGGGCAACATTGCTCGC TTGATAAACCATTCTTGCATGCCAAACTGCTATGCCAGGATCGTGACTTTGGGTGATCGGGAGAGCCGGATTGTTCTGATTGCCAAGATTAACGTTTCTG CTGGGGAAGAACTCACGTATGATTATTTGTTTGATCCAGATGAGCGTGATGAATTGAAGGTTCCATGCCTTTGCAATGCTCCTAATTGTAAAAAATTTAT GAACTAGGTTTTCACAGTTTTTTGTTCCTAGAGCAATAAGCAATTGTATTAACCTAACCATAGAGATCAAATTTGTCCATTGGAGCATATATTCTTTTGT TGTTTCCAAAATATTGGCATAATTTGTATATCATTTTGCTATTATACAGTAAATATCTTAGTAATGGGTGTAACTTGCGACATGGTTTATATATATATCC AAATTGTTTACATTTGAAAGCAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_154726; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_374102
Blastp | Histone-lysine N-methyltransferase ATX3 from Arabidopsis with 56.58% of identity |
---|---|
Blastx | Histone-lysine N-methyltransferase ATX5 from Arabidopsis with 49.49% of identity |
Eggnog | Histone-lysine N-methyltransferase(COG2940) |
Kegg | Link to kegg annotations (AT3G61740) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461947.1) |
Pfam | PWWP domain (PF00855.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |