Id Trinity | TRINITY_DN47701_c2_g1_i13 |
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Name Transcript | Ll_transcript_374370 |
Sequence | GTCTTATTTGGTATTGTAGTTTCTTACAGTTATTTACATTATGATATTTGTCTTGTTTTATTCCCTAACAATATTGTTGAATTGTTGCAGCTGTCCACCA CAGACTTGTACCAGGATTTTATTTTATTGGACGCATCTGATGCTGTTGCAGTTGACGGGTTTATAAAGGGAAGCAAAACTGATATAGCACAAAACGCTGC TGAAAGACCAACCTCAGCCCGTAAAACCTTTCTTTCTCCTACAAGATGCTCTGTGGGAAGTGCTCATAAATCATCGGATGCAAAGAGTCAGCGGGCTAAT CCCAACTGTTCCCCCAAACTTAATTGCAGTTATGATGACAACAACGTCCATCCCAGTTCTCCTATCTTTGCTGGTGATGTGGATGATGGATTCGACCCAT CTAGGGATTCAGACAATTCAGATGCCGATGATCCATGGAAACCATTAAATCCGCATGAACCAGGCAACTTGAGGGTGAAGCCTTTTAGGAAAGTGAAAAC TTTAAAAAAGAATCGCATCAATGTGACACGTCAAGTTTCCATGAGCATGTTGTTTCCAGTTGCAAAATTGCATGGTCCTATCAGTTCGGAGCTCATGGAA ATGTGGGAGAT BLAST |
Tissue | pods |
Gene name | LI_gene_154736; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_374370
Blastp | Condensin-2 complex subunit H2 from Arabidopsis with 46.81% of identity |
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Blastx | Condensin-2 complex subunit H2 from Arabidopsis with 46.81% of identity |
Eggnog | non-SMC condensin II complex, subunit H2(ENOG4111BR3) |
Kegg | Link to kegg annotations (AT3G16730) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419766.1) |
Pfam | PF16858 (PF16869.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |