Ll_transcript_374363

• Id Trinity: TRINITY_DN47701_c2_g1_i6
• Name Transcript: Ll_transcript_374363
• Sequence: ATATAATCGAAATTCAAAGAATTTTGGACCTTCCTTCTCTTCGCTCTTCTCTACACACCACAGTGGAATTCATAAAATTCAAACTTGGCAGCACCCATTT TCCAATTCCTGGTAAATTTCAAAACCCAGTTTTTCGTTTTCAGAATTCTCCAATTCCTTGCTGGAAAACTGAAACCCTAGGGTTTTCTTCTCCGCTTCCA GAATTCATAAGATTACAATGATTTGCATAGATATTTTGTCCACTGATGATGAATAAAGTTACCTCGGAACACGGTGGCGGTGGCACCTTCCACGCCGTTC ATGCAGAGCGTGACCTAGAATCCAATTGGGAAGTTGACCTAGCCAAGAAACTTGAAGAGTATCTGCTCAAAATTAGCTCTGGTGAAATCACCGGCTACGA AGAAAACCATGATACTCTAAATTTTGCAGAAGCTGCGCTGTTGCTTCAGGGTTCCATTCAGGTGTATAGTAGGAAAGTGGAGTATCTCTACAACTTGGTA TTGCGTGCTTTAGAGTTCCTTTCGCATAAAAGACAGCAAGATCATATAGATGGGGCATCAATCCAACCTGAAGAAAATGGTCCATGTGCTGTTGCTGATG AAGAAAATGATCAATTCTGGGGCTTAGATGACATCCCAGTCGATGAGAAGAATTCCTTGGAGATTTCAACAGACAAAGAAGTGAATTTGAATCACTTTGT AAAACCCCCTTCAAATTTGGTTGTTCTTGAAGGTGACTGCTTAGATTCTACTGGTGATGGTGGGGAATTGGAGTCTTATTTGCTGTCCACCACAGACTTG TACCAGGATTTTATTTTATTGGACGCATCTGATGCTGTTGCAGTTGACGGGTTTATAAAGGGAAGCAAAACTGATATAGCACAAAACGCTGCTGAAAGAC CAACCTCAGCCCGTAAAACCTTTCTTTCTCCTACAAGATGCTCTGTGGGAAGTGCTCATAAATCATCGGATGCAAAGAGTCAGCGGGCTAATCCCAACTG TTCCCCCAAACTTAATTGCAGTTATGATGACAACAACGTCCATCCCAGTTCTCCTATCTTTGCTGGTGATGTGGATGATGGATTCGACCCATCTAGGGAT TCAGACAATTCAGATGCCGATGATCCATGGAAACCATTAAATCCGCATGAACCAGGCAACTTGAGGGTGAAGCCTTTTAGGAAAGTGAAAACTTTAAAAA AGAATCGCATCAATGTGACACGTCAAGTTTCCATGAGCATGTTGTTTCCAGTTGCAAAATTGCATGGTCCTATCAGTTCGGAGCTCATGGAAATGTGGGA GATGCGACATCATGCCCATGAACATAAAAAAGATTCTCAATCTGCTCCATTATATGAGAAGCTGAGGCAAACTCTCACTAGTGAGTTGCCTGAAACTGGT GGAACATTAGACTTTGAATCTGACAATGATGACAACAGATATGATACTGGAAATCCTGATTTTGATATGCCGGGAAATGCCTACACGGATGAAGATTTTC CTCCTTGGAATAAAGAGCATAAATTTGATGATGTTCATGCCGAGGCTAGTGAATATCCTGAATATCCAAATTCTCAGGAAAGCTTAGAAGATCTTTGTCG CTCGCACTTGAATGCTCTCCTAGCTAGCATAGCCGAATCTGAGAAGCAAACTGAAATGGCTGCTAGGGTTTCAACATGGAAACAGAGAATCGAGCACCAT CTGGAAGGACAGGAATCACACCCACCATTCGATATCCGCGACTATGGTGAGAGAATTCTGGACAAACTATCAGTTGAAGAAAGCAGTAACTCTGTCCTAC CTTTCTCTGATCTAGTCAGTGGACAAGAAAAGTATGACGTGGCCCGAAGCTTTTCTTCTCTTCTTCAACTGGTGAACAATGGAGAAGTAAATCTAGAAAG AAATGGACTTGATGGGGAGCCTGTGTGCTATACTTCTATTAATCCTTTTCAAGTTAAGCTCCTTAAGCACAATAAGAATCAGGAGGATGCACAATTTCGT TTGTCGAAAAAGAGAGCGAAGTCTCCAACAAAGAAATCGGCTGCAAAAGGTGACAAGATCAAAGGTGGAAGGGAGAAGTCTCTCAATTCATCTTTACCAA CAGGGTCCCCTCCATCAAATTGCAAATTTCCAGTGAAGCTTGGAAAGGCGAGTACCATACGGTTATCTCCCGAGACTAAGAGGAGGCGTAGATCCTTGCG ATCAGCAGGGTGACATTGACAATTAGCAGCCTAATGATTCAATGTAGGACATTTGTTTGTTGCATGGAACTTACTTAGGATAGGGAATTAGGGATGTGTT ATTGCAGGCCTAGGTCTCAGAAATACTAACATTCATCAGCTTCCAACTGAATTATTGTTGCTTTGGACATTAATATATTGTTGTAATGATATCTTACGTT GTAACACATTGTATTCTTATTCTTCATGAATGTAATAACTTATAATGACAATCAGTTTAATAATTGTAACTTATCTTCCAAAATTTTCTCCACTTTTTG
• Tissue: pods
• Gene name: LI_gene_154736;
• Additional information: details;

Expression of Ll_transcript_374363

FPKM

• PAB: 1.5
• PNAB: 7.1
• PS1: 5.2
• PS2: 3
• PS3: 3.4
• PW1: 3.8
• PW2: 1.8
• PW3: 1.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_374363

• Blastp: Condensin-2 complex subunit H2 from Arabidopsis with 50.75% of identity
• Blastx: Condensin-2 complex subunit H2 from Arabidopsis with 50.75% of identity
• Eggnog: non-SMC condensin II complex, subunit H2(ENOG4111BR3)
• Kegg: Link to kegg annotations (AT3G16730)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419763.1)
• Pfam: Condensin II complex subunit CAP-H2 or CNDH2, N-terminal (PF06278.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;