Ll_transcript_375491

• Id Trinity: TRINITY_DN47703_c5_g3_i1
• Name Transcript: Ll_transcript_375491
• Sequence: GGCCTTATTATTCTTAGCCAAAAAAACAATACATTCCAAACTTGTCCAAATACAATTAGAGAATGATTCCTTGGCAAGTTTATTATAACAGCAGGATTTG ACCGTTACATTTTTCGTCCACGTGTAACAATCTAATTGGTTTAAGTTTCCGTTGCCGTGATGAAGCGATTCACCGTTTTGCTATAAAAACGAAACCCCAA CGTAGAATCATCATCACAAATCACAAATTTGAATTTCTCCATTCGAATTGAAAACCCTAGCACACCGTTTCAAGATGCAAATCTTTGTTAAGACGCTCAC CGGCAAGACCATCACTCTCGAAGTTGAGAGTTCTGATACCATAGATAATGTAAAGGCTAAAATTCAAGACAAGGAAGGAATCCCGCCGGATCAACAACGT CTCATTTTTGCTGGCAAGCAACTTGAGGATGGACGTACACTTGCTGATTACAACATCCAAAAGGAGTCTACACTCCATTTAGTGCTCCGTCTTCGTGGTG GTATGCAAATCTTTGTCAAGACATTAACCGGAAAGACCATCACACTTGAAGTTGAGAGTTCTGATACCATAGATAACGTAAAGGCCAAAATTCAAGACAA AGAAGGCATCCCACCGGACCAACAGAGGCTTATCTTTGCTGGCAAGCAACTCGAGGATGGCCGGACCTTAGCTGACTATAACATCCAGAAGGAGTCCACC CTCCATTTAGTGCTTCGTCTTCGTGGTGGTATGCAAATCTTTGTCAAGACATTAACCGGAAAGACCATCACACTTGAAGTGGAGAGCTCTGACACAATTG ACAATGTGAAGGCCAAAATTCAAGACAAAGAGGGCATTCCACCAGACCAACAGAGGCTTATCTTTGCTGGCAAGCAACTCGAGGATGGTCGGACCTTAGC TGACTACAACATCCAGAAAGAGTCAACTCTCCACCTTGTCTTGCGTCTTCGTGGTGGTATGCAGATTTTTGTCAAGACCCTTACTGGCAAGACAATCACT CTTGAGGTAGAGAGCTCGGACACGATCGATAATGTGAAAGCCAAGATTCAAGACAAAGAGGGTATCCCGCCAGACCAGCAAAGGTTGATATTTGCTGGGA AACAGCTTGAAGATGGACGTACTCTGGCAGACTACAATATTCAGAAGGAGTCTACCCTTCACCTTGTCTTGCGTCTGAGGGGAGGAATGCAGATCTTTGT GAAGACTTTGACCGGTAAGACCATCACTTTGGAGGTTGAAAGTTCGGACACAATCGACAATGTGAAAGCAAAAATCCAGGACAAGGAGGGGATCCCACCA GACCAGCAGAGGTTGATCTTTGCTGGGAAGCAGTTGGAGGATGGAAGGACCCTTGCTGACTACAACATTCAAAAGGAGTCCACTCTTCACCTTGTTTTAC GTCTTCGTGGAGGACTTTAAGCATGTAAGCCCAAGCTCTATCGGTTTTGATATTATGATCTTGAATAAAGAACTCTGTATGTTTTTATGGGATGAGTCCC TATGTGTGTGTGGAAACTGGGAAGGTCCTGCAAGGCCTTAAAAACAGCTTCCTGTGGTTTCTGTTTTAATTCAATTCTAAGTTGAAATGCATATTCTGTT TGTCGGTTCACAACTTTTAATGTCTATTGTTAGCTGCATGATATATGTTCTATATAATATATAGTTCTGGATGAATGGAATTGTGATTATAAGGTTTGTT TCTAAGTTGGTTCTCAGAGAGAATGATTTGAAAATCATGAGATAGCAAATCGAGTTGTGATTAACCACAGGCTCATGGCTCACACAGTTATATATGTATA TCTGTAATCTTTCGTGTGAATTTCATTCATGTCCATTCTTTCCATAAGAGGCTCACCCAGTCATACCTTTAGGACCGGG
• Tissue: pods
• Gene name: LI_gene_154758;
• Additional information: details;

Expression of Ll_transcript_375491

FPKM

• PAB: 75.8
• PNAB: 38.6
• PS1: 26.3
• PS2: 17
• PS3: 19.8
• PW1: 23
• PW2: 17.6
• PW3: 13.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_375491

• Blastp: Polyubiquitin from Pisum with 99.74% of identity
• Blastx: Polyubiquitin 4 from Arabidopsis with 100% of identity
• Eggnog: -
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0000474)
• Mirbase: hsa-mir-4426 (MI0016765)
• Ncbi protein: Link to NCBI protein (XP_006593991.1)
• Pfam: Ubiquitin-2 like Rad60 SUMO-like (PF11976.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;