Ll_transcript_375498

• Id Trinity: TRINITY_DN47703_c5_g3_i6
• Name Transcript: Ll_transcript_375498
• Sequence: GGCCTTATTATTCTTAGCCAAAAAAACAATACATTCCAAACTTGTCCAAATACAATTAGAGAATGATTCCTTGGCAAGTTTATTATAACAGCAGGATTTG ACCGTTACATTTTTCGTCCACGTGTAACAATCTAATTGGTTAAGTTTCCGTTGCCGTGATGAAGCGATTCACCGTTTTGCTATAAAAACGAAACCCCAAC GTAGAATCATCATCACAAATCACAAATTTGAATTTCTCCATTCGAATTGAAAACCCTAGCACACCGTTTCAAGGTATGCTATCTTCTCTTCTTCTCGTTT TCGCGTTTATTCTTCACTTTTGCATTCTCTATGCTGATTACTCTATTGTGTTTGATTCAATTTTTTGACATGGATCTGGAACGTTTAATTGTTTTGATTC AATTATTAGGGTTCTGTATCTTCATATTAATTGATGGAAAACTGATAATTGAATTTGTTCAGACCTTGGATCTTGATGTTTGATTCAATGATCGTGGTCG TTGGTTTGAGCTTTTTCTGTTATGAGTCTCTTTTCAAACTTCGTTCATGATTTTACTTTTAGCGAATAATCATACTAAGGCTAGATCTTCATGAAATGTT TCTTATTTGATATGCTAATATCATTCGTGTGATGAAACTGTTTGAGATTTGCCAGAGGTATACATATATGTGATGAAAGTATCATATATTATGATACACG TTGGTTTATTGTCTAGTTTGTTTCAATTGATTCCTTGTTTGTAAACCTTTTTCAATCATATGATAAAGATTGGGCCTGTTTTTTCTTGTTTTGAAATTTG GATCAATCTTATTATAAATCTCGTTCTATATTTAGTCGATTTTAAGGGCTCTGCTTATCTTGTTTCAGACATCTGTATATGTAGTCATGTATGTGTATTT TTCTTTGTAAAAGGCCTTGCCAAAACATTGATTACTGACTTATTTGTTTATTTGCTATGAGCAGATGCAAATCTTTGTTAAGACGCTCACCGGCAAGACC ATCACTCTCGAAGTTGAGAGTTCAGATACCATAGATAATGTAAAGGCTAAAATTCAAGACAAGGAAGGAATCCCGCCGGATCAACAACGTCTCATTTTTG CTGGCAAGCAACTTGAGGATGGACGTACACTTGCTGATTACAACATCCAAAAGGAGTCTACACTCCATTTAGTGCTCCGTCTTCGTGGTGGTATGCAAAT CTTTGTCAAGACATTAACCGGAAAGACCATCACACTTGAAGTTGAGAGTTCTGATACCATAGATAACGTAAAGGCCAAAATTCAAGACAAAGAAGGCATC CCACCGGACCAACAGAGGCTTATCTTTGCTGGCAAGCAACTCGAGGATGGCCGGACCTTAGCTGACTATAACATCCAGAAGGAGTCCACCCTCCATTTAG TGCTTCGTCTTCGTGGTGGTATGCAAATCTTTGTCAAGACATTAACCGGAAAGACCATCACACTTGAAGTGGAGAGCTCTGACACAATTGACAATGTGAA GGCCAAAATTCAAGACAAAGAGGGCATTCCACCAGACCAACAGAGGCTTATCTTTGCTGGCAAGCAACTCGAGGATGGTCGGACCTTAGCTGACTACAAC ATCCAGAAAGAGTCAACTCTCCACCTTGTCTTGCGTCTTCGTGGTGGTATGCAGATTTTTGTCAAGACCCTTACTGGCAAGACAATCACTCTTGAGGTAG AGAGCTCGGACACGATCGATAATGTGAAAGCCAAGATTCAAGACAAAGAGGGTATCCCGCCAGACCAGCAAAGGTTGATATTTGCTGGGAAACAGCTTGA AGATGGACGTACTCTGGCAGACTACAATATTCAGAAGGAGTCTACCCTTCACCTTGTCTTGCGTCTGAGGGGAGGAATGCAGATCTTTGTGAAGACTTTG ACCGGTAAGACCATCACTTTGGAGGTTGAAAGTTCGGACACAATCGACAATGTGAAAGCAAAAATCCAGGACAAGGAGGGGATCCCACCAGACCAGCAGA GGTTGATCTTTGCCGGAAAACAACTTGAGGATGGCCGCACCCTTGCAGACTATAATATCCAGAAGGAGTCTACCCTTCATCTTGTGCTGCGTCTCAGGGG TGGCATGCAGATTTTCGTGAAGACCCTTACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCTGACACCATCGATAATGTTAAGGCGAAGATCCAGGAT AAGGAGGGTATTCCTCCAGACCAGCAGAGGCGGATCTTTGCTGGTAAACAGCTTGAAG
• Tissue: pods
• Gene name: LI_gene_154758;
• Additional information: details;

Expression of Ll_transcript_375498

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0
• PS2: 0.1
• PS3: 0
• PW1: 0
• PW2: 0.1
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_375498

• Blastp: Polyubiquitin 10 from Arabidopsis with 99.77% of identity
• Blastx: Polyubiquitin 10 from Arabidopsis with 99.77% of identity
• Eggnog: ubiquitin(COG5272)
• Kegg: Link to kegg annotations (AT4G02890)
• CantataDB: Link to cantataDB annotations (CNT0000474)
• Mirbase: hsa-mir-4426 (MI0016765)
• Ncbi protein: Link to NCBI protein (XP_012572548.1)
• Pfam: Ubiquitin-2 like Rad60 SUMO-like (PF11976.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;