| Id Trinity | TRINITY_DN47703_c5_g3_i7 |
|---|---|
| Name Transcript | Ll_transcript_375500 |
| Sequence | GGCCTTATTATTCTTAGCCAAAAAAACAATACATTCCAAACTTGTCCAAATACAATTAGAGAATGATTCCTTGGCAAGTTTATTATAACAGCAGGATTTG ACCGTTACATTTTTCGTCCACGTGTAACAATCTAATTGGTTTAAGTTTCCGTTGCCGTGATGAAGCGATTCACCGTTTTGCTATAAAAACGAAACCCCAA CGTAGAATCATCATCACAAATCACAAATTTGAATTTCTCCATTCGAATTGAAAACCCTAGCACACCGTTTCAAGGTATGCTATCTTCTCTTCTTCTCGTT TTCGCGTTTATTCTTCACTTTTGCATTCTCTATGCTGATTACTCTATTGTGTTTGATTCAATTTTTTGACATGGATCTGGAACGTTTAATTGTTTTGATT CAATTATTAGGGTTCTGTATCTTCATATTAATTGATGGAAAACTGATAATTGAATTTGTTCAGACCTTGGATCTTGATGTTTGATTCAATGATCGTGGTC GTTGGTTTGAGCTTTTTCTGTTATGAGTCTCTTTTCAAACTTCGTTCATGATTTTACTTTTAGCGAATAATCATACTAAGGCTAGATCTTCATGAAATGT TTCTTATTTGATATGCTAATATCATTCGTGTGATGAAACTGTTTGAGATTTGCCAGAGGTATACATATATGTGATGAAAGTATCATATATTATGATACAC GTTGGTTTATTGTCTAGTTTGTTTCAATTGATTCCTTGTTTGTAAACCTTTTTCAATCATATGATAAAGATTGGGCCTGTTTTTTCTTGTTTTGAAATTT GGATCAATCTTATTATAAATCTCGTTCTATATTTAGTCGATTTTAAGGGCTCTGCTTATCTTGTTTCAGACATCTGTATATGTAGTCATGTATGTGTATT TTTCTTTGTAAAAGGCCTTGCCAAAACATTGATTACTGACTTATTTGTTTATTTGCTATGAGCAGATGCAAATCTTTGTTAAGACGCTCACCGGCAAGAC CATCACTCTCGAAGTTGAGAGTTCAGATACCATAGATAATGTAAAGGCTAAAATTCAAGACAAGGAAGGAATCCCGCCGGATCAACAACGTCTCATTTTT GCTGGCAAGCAACTTGAGGATGGACGTACACTTGCTGATTACAACATCCAAAAGGAGTCTACACTCCATTTAGTGCTCCGTCTTCGTGGTGGTATGCAAA TCTTTGTCAAGACATTAACCGGAAAGACCATCACACTTGAAGTTGAGAGTTCTGATACCATAGATAACGTAAAGGCCAAAATTCAAGACAAAGAAGGCAT CCCACCGGACCAACAGAGGCTTATCTTTGCTGGCAAGCAACTCGAGGATGGCCGGACCTTAGCTGACTATAACATCCAGAAGGAGTCCACCCTCCATTTA GTGCTTCGTCTTCGTGGTGGTATGCAAATCTTTGTCAAGACATTAACCGGAAAGACCATCACACTTGAAGTGGAGAGCTCTGACACAATTGACAATGTGA AGGCCAAAATTCAAGACAAAGAGGGCATTCCACCAGACCAACAGAGGCTTATCTTTGCTGGCAAGCAACTCGAGGATGGTCGGACCTTAGCTGACTACAA CATCCAGAAAGAGTCAACTCTCCACCTTGTCTTGCGTCTTCGTGGTGGTATGCAGATTTTTGTCAAGACCCTTACTGGCAAGACAATCACTCTTGAGGTA GAGAGCTCGGACACGATCGATAATGTGAAAGCCAAGATTCAAGACAAAGAGGGTATCCCGCCAGACCAGCAAAGGTTGATATTTGCTGGGAAACAGCTTG AAGATGGACGTACTCTGGCAGACTACAATATTCAGAAGGAGTCTACCCTTCACCTTGTCTTGCGTCTGAGGGGAGGAATGCAGATCTTTGTGAAGACTTT GACCGGTAAGACCATCACTTTGGAGGTTGAAAGTTCGGACACAATCGACAATGTGAAAGCAAAAATCCAGGACAAGGAGGGGATCCCACCAGACCAGCAG AGGTTGATCTTTGCTGGGAAGCAGTTGGAGGATGGAAGGACCCTTGCTGACTACAACATTCAAAAGGAGTCCACTCTTCACCTTGTTTTACGTCTTCGTG GAGGACTTTAAGCATGTAAGCCCAAGCTCTATCGGTTTTGATATTATGATCTTGAATAAAGAACTCTGTATGTTTTTATGGGATGAGTCCCTATGTGTGT GTGGAAACTGGGAAGGTCCTGCAAGGCCTTAAAAACAGCTTCCTGTGGTTTCTGTTTTAATTCAATTCTAAGTTGAAATGCATATTCTGTTTGTCGGTTC ACAACTTTTAATGTCTATTGTTAGCTGCATGATATATGTTCTATATAATATATAGTTCTGGATGAATGGAATTGTGATTATAAGGTTTGTTTCTAAGTTG GTTCTCAGAGAGAATGATTTGAAAATCATGAGATAGCAAATCGAGTTGTGATTAACCACAGGCTCATGGCTCACACAGTTATATATGTATATCTGTAATC TTTCGTGTGAATTTCATTCATGTCCATTCTTTCCATAAGAGGCTCACCCAGTCATACCTTTAGGACCGGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_154758; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_375500
| Blastp | Polyubiquitin from Pisum with 99.74% of identity |
|---|---|
| Blastx | Polyubiquitin 4 from Arabidopsis with 100% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0000474) |
| Mirbase | hsa-mir-4426 (MI0016765) |
| Ncbi protein | Link to NCBI protein (XP_020998071.1) |
| Pfam | Ubiquitin-2 like Rad60 SUMO-like (PF11976.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |