| Id Trinity | TRINITY_DN47704_c1_g4_i1 |
|---|---|
| Name Transcript | Ll_transcript_374570 |
| Sequence | AAAGGAGTGGATGTGAAAAGCAACCACCCTGATTTGACTTGACCCGAAGGGCCCATTAGTGAGAGTGAGACCCGAACCCGATCCTGAAGTGGACTTTTCA GACGAATGACCTCGACGAGTGTTGCTATTGGCCTAACTCGAAATTCAGCGGAAGATGGAATTGGAAATCGATGACAAGGACTTGAAAGCCGCCGGCGCTG AAGTCTTCGTTGACGGCGGCCGTCGCGGCATCCGAATCCATGGCTGGCTCATTGAGACTCGCAGGAATTCTATTCTCAACTCCTCATCCGTTCAACAATG GGAACAGAAACTTGAGACATCTCACTTACCAGAAATGGTTTTTGGGGAAAACACATTAATTCTAAAACATTTGGTTAGTGGCACCAAAATTCATTTCAAC GCATTTGATGCTCTATCTGGTTGGAAACAGGAAGCCTTGCCACCTGTTGAAGTTCCTGCTGCTGCTAAATGGAAGTATAGAACCAAGCCCTCTCAGCAAG TAATACTGGATTATGATTATACATTTACAACGCCTTATTGTGGAAGTGGCAGAATTGAGATCGATAAAGATACGAATGGGAGAGACAATTCTGAGGAAAC CAAAACTCTCAATTGGGAAGTCTGCAAGGAGCAAATTGATGTAGCTGCGTTGACATCCAAAGAGCCTATACTTTTCTATGACGAGGTGGTCTTATACGAG GATGAACTTGCTGATAATGGAGTGTCACTTCTTACTGTGAAAGTGAGAGTCATGCCAAGTTCTTGGTTTCTTCTCTTGCGATTCTGGCTTAGAGTTGATG GAGTGTTGGTTCGACTGAGAGAAACTCGAATGCATTTTATATTTGGTGGAAGCACAAATCCAATTATTCTTCGAGATACTTGCTGGAGAGAATCTACATT TCAGGATTTGTCTGCGGTAAGTTTGAGACAATTGCTGCTATGCAAGTTTCTTTTGCTATGATAAAGTAAGTACTATATAATACTTATTGAGAGAGCCATT ATTTTCATTGGGCTTCTGATTGAATAGCGTCCCTAGATATAATGCTGAAGAAATAAATCTCAGTTGCTGTGGTCTAGTTGACAGTGAAGTTAGTAACTAG GTAGAATACTTGTATAAATGATTCAGAGATAAATAGTTGAGTATGAGAAGAGGGCTCTGCTGTGAAGCTGCTCGAGTAAAAGGACAGGCTATTTGATATG CAAAATTAATTGTCATGTTTTTGGCTTTACATAGAAAGATTGAGGTAAATGACAGAAGGAAAATGACGTGAAGAATGTAAAATCATCTTACCCCCTACAT AAAATAATAAAATGCAGGTACCATGCAATTGTATGTTCTTGTTTACTTTTCTGCCTGATTTTGACTCATCCAGAATGGTTCACAAATGTGGGCTCCTTCC AGTGCTAATATTTTCATTTATCTGATCTATTTGTGATTAGACTAAAGGAAACATGAATCTCAATTATTTCTCATTATTTTCTTTAAAATCTGGCCTACCC AAAAAAACATCAATCTTCAAGCCTTAAGACGGTGACAGCCAGCTATTTGACTGATAGTAGTCATAATCTCATCACATTAGTTTTAATTTTTCTTTTCTAT GTTTTCTTATCATCCTTTTACTGTACATATTTCTCTTTGAGTTGTATTGAAAAAGCTGTCAATAACAGTAAGTTGTAATATATTATTGACTGCCATTCTA ATGTTATTGGTTCTCTGATTGATTGATGCAGAAAGGGAAGCCTTTTGAGTCAGCTGCATATAATGATGACCCAAGCATCATCAGCCAGAGGCTCCCCATC GTCATGCATAAGACCCAAAAGCTTGTAATTCCCTCGTAAGTTATAGGGATGTAAATTCACCCGATGCAAAATGGATTCCGGCAAATCCTTATCTTGTTCA TATTATCTTCAAACACCTACCTTGGCTGTTGAAACTATCAGTTGCTTTGAATGAATTTAGCTAAACTTAAGATGCAAACTAATCAGTAATCACGTTTTGT ACGTATACAATATACATTATATTTATAGACTAAGAGATAAAATGGCAATAGGTGTTTGAAACTCGTTGAGGAGCTTGCCTAGAAGCTTCATATTGATTCA TTTGTCACTATAGTCTTATTTATATATGTATTTAGGAAACTCTATCTCAATCAATGCATCTAAAGTGTCACTGACAGCTGTCACATGTCAATCACTTATA TTTTTACTTCGATGAAAAGCATGGTTTAGCAAATAGAATATAAGTGCAGCTATTTGAGCATC BLAST |
| Tissue | pods |
| Gene name | LI_gene_154769; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_374570
| Blastp | TIP41-like protein from Arabidopsis with 72.94% of identity |
|---|---|
| Blastx | TIP41-like protein from Arabidopsis with 72.94% of identity |
| Eggnog | TIP41, TOR signaling pathway regulator-like (S. cerevisiae)(ENOG410XT96) |
| Kegg | Link to kegg annotations (AT4G34270) |
| CantataDB | Link to cantataDB annotations (CNT0001789) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452469.1) |
| Pfam | TIP41-like family (PF04176.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |