Ll_transcript_374577

• Id Trinity: TRINITY_DN47704_c1_g4_i3
• Name Transcript: Ll_transcript_374577
• Sequence: AAAGGAGTGGATGTGAAAAGCAACCACCCTGATTTGACTTGACCCGAAGGGCCCATTAGTGAGAGTGAGACCCGAACCCGATCCTGAAGTGGACTTTTCA GACGAATGACCTCGACGAGTGTTGCTATTGGCCTAACTCGAAATTCAGCGGAAGATGGAATTGGAAATCGATGACAAGGACTTGAAAGCCGCCGGCGCTG AAGTCTTCGTTGACGGCGGCCGTCGCGGCATCCGAATCCATGGCTGGCTCATTGAGACTCGCAGGAATTCTATTCTCAACTCCTCATCCGTTCAACAATG GGAACAGAAACTTGAGACATCTCACTTACCAGAAATGGTTTTTGGGGAAAACACATTAATTCTAAAACATTTGGTTAGTGGCACCAAAATTCATTTCAAC GCATTTGATGCTCTATCTGGTTGGAAACAGGAAGCCTTGCCACCTGTTGAAGTTCCTGCTGCTGCTAAATGGAAGTATAGAACGTAAGTTTTTCATATTT GGATGCAATAATGTACTTTCATGTTTTATTTCAGGTTACAAATGTGTTTCGCTTAAAAATCGTCTATTATTGTATTTGGATGAGTTTGCTTAAATCCTTT TGATTTTTTTGAAACTGCCTTGGAATTGATTAGGAAATCAATGAAATTGTGAAAGTTTTCTTTCAATCGTGCTGCTTTCTTGACAAAATTAATCTCACAC TGTTTTGGGGAAATGTGTAGCAAGCCCTCTCAGCAAGTAATACTGGATTATGATTATACATTTACAACGCCTTATTGTGGAAGTGGCAGAATTGAGATCG ATAAAGATACGGTATTCATTCCATTTTAATTCTCCATGGACTGAATGTGCCATTAATGCCTTTTTTCTTTTATCCGAGTCACTTGTTCAATATAATTTTT GTAGTACAGTTTTCTGCTCCATATAGTTGTTTGTTAATAGCCTACAGCTACATGATGGTACTTTTGTTAGCATAAATTCTGGAAAATCGCAATAATGTTA TTGTCTATGACTTTATGTTGTTACTCAAGATATTTAGTTTTGTATGGTAGAATGGGAGAGACAATTCTGAGGAAACCAAAACTCTCAATTGGGAAGTCTG CAAGGAGCAAATTGATGTAGCTGCGTTGACATCCAAAGAGCCTATACTTTTCTATGACGAGGTGGTCTTATACGAGGATGAACTTGCTGATAATGGAGTG TCACTTCTTACTGTGAAAGTGAGAGTCATGCCAAGTTCTTGGTTTCTTCTCTTGCGATTCTGGCTTAGAGTTGATGGAGTGTTGGTTCGACTGAGAGAAA CTCGAATGCATTTTATATTTGGTGGAAGCACAAATCCAATTATTCTTCGAGATACTTGCTGGAGAGAATCTACATTTCAGGATTTGTCTGCGGTAAGTTT GAGACAATTGCTGCTATGCAAGTTTCTTTTGCTATGATAAAGTAAGTACTATATAATACTTATTGAGAGAGCCATTATTTTCATTGGGCTTCTGATTGAA TAGCGTCCCTAGATATAATGCTGAAGAAATAAATCTCAGTTGCTGTGGTCTAGTTGACAGTGAAGTTAGTAACTAGGTAGAATACTTGTATAAATGATTC AGAGATAAATAGTTGAGTATGAGAAGAGGGCTCTGCTGTGAAGCTGCTCGAGTAAAAGGACAGGCTATTTGATATGCAAAATTAATTGTCATGTTTTTGG CTTTACATAGAAAGATTGAGGTAAATGACAGAAGGAAAATGACGTGAAGAATGTAAAATCATCTTACCCCCTACATAAAATAATAAAATGCAGGTACCAT GCAATTGTATGTTCTTGTTTACTTTTCTGCCTGATTTTGACTCATCCAGAATGGTTCACAAATGTGGGCTCCTTCCAGTGCTAATATTTTCATTTATCTG ATCTATTTGTGATTAGACTAAAGGAAACATGAATCTCAATTATTTCTCATTATTTTCTTTAAAATCTGGCCTACCCAAAAAAACATCAATCTTCAAGCCT TAAGACGGTGACAGCCAGCTATTTGACTGATAGTAGTCATAATCTCATCACATTAGTTTTAATTTTTCTTTTCTATGTTTTCTTATCATCCTTTTACTGT ACATATTTCTCTTTGAGTTGTATTGAAAAAGCTGTCAATAACAGTAAGTTGTAATATATTATTGACTGCCATTCTAATGTTATTGGTTCTCTGATTGATT GATGCAGAAAGGGAAGCCTTTTGAGTCAGCTGCATATAATGATGACCCAAGCATCATCAGCCAGAGGCTCCCCATCGTCATGCATAAGACCCAAAAGCTT GTAATTCCCTCGTAAGTTATAGGGATGTAAATTCACCCGATGCAAAATGGATTCCGGCAAATCCTTATCTTGTTCATATTATCTTCAAACACCTACCTTG GCTGTTGAAACTATCAGTTGCTTTGAATGAATTTAGCTAAACTTAAGATGCAAACTAATCAGTAATCACGTTTTGTACGTATACAATATACATTATATTT ATAGACTAAGAGATAAAATGGCAATAGGTGTTTGAAACTCGTTGAGGAGCTTGCCTAGAAGCTTCATATTGATTCATTTGTCACTATAGTCTTATTTATA TATGTATTTAGGAAACTCTATCTCAATCAATGCATCTAAAGTGTCACTGACAGCTGTCACATGTCAATCACTTATATTTTTACTTCGATGAAAAGCATGG TTTAGCAAATAGAATATAAGTGCAGCTATTTGAGCATC
• Tissue: pods
• Gene name: LI_gene_154769;
• Additional information: details;

Expression of Ll_transcript_374577

FPKM

• PAB: 0.2
• PNAB: 0
• PS1: 0.2
• PS2: 0.5
• PS3: 0
• PW1: 0
• PW2: 0.4
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_374577

• Blastp: TIP41-like protein from Arabidopsis with 69.09% of identity
• Blastx: TIP41-like protein from Arabidopsis with 75.22% of identity
• Eggnog: TIP41, TOR signaling pathway regulator-like (S. cerevisiae)(ENOG410XT96)
• Kegg: Link to kegg annotations (AT4G34270)
• CantataDB: Link to cantataDB annotations (CNT0001789)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452469.1)
• Pfam: TIP41-like family (PF04176.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;