Id Trinity | TRINITY_DN47709_c2_g1_i3 |
---|---|
Name Transcript | Ll_transcript_374387 |
Sequence | CTAAAACAATGATACATCTGTATCTCATCCTAAACTTGCAATGGTCAATCTCGACATGCTCCCAGCTTCTTCATCTTCTGTATCTTGTCCTAAACAATAT GATGTTTTTCTTAGCTTTCATGGACAGGATACTCGTAATAACTTCACAACACATCTTTATGGCTATCTTCAACAAAACAATGTTAAAACCTTTATAGACT ATGACCTTGAAAGAGGACATGAGATCTCACCAGCAATCATGAAAGCTATTGATGAATCACATGTATCTATAATCATCTTCTCTCTAAACTATGCTTCCTC TAAATGGTGCTTAGATGAACTTACCAAAATTATGGACTGCCATAAATCTACGGAACAAGATGTGATACCTGTGTTCTATAATGTAGACCCTGCACATGTG AGGAAACAGGTTGGGAGTTACAAGAATGCTTTTACAAAACATGAGAAAGATATGAGACACAACATGGAGAAGGTGCAGAAATGGAGAGTAGCTCTCACTC AAGCATCCAATTTAGCTGGCTTCACATGGGACTCAAAAAGAGATAGGAACGAATTTGAATTCATTAAGGATATTGTTGGAGATGTTATGAAGAAGCTCAA TCTTAGATACCCAATTGAATTGAAGGGATTGGTTGGAATTGAGGAAAATTATGCAGAGATTGAATCATTAATGAAAATTAGACCGAGTGAGGTAGGAATC ATTGGAATATGGGGCATGGGAGGCATAGTGGGATACAGGCCCTTTTGGACATGGCACTCATAACTATCTCCTCTGGTAATACAATAGAAATGCATGACTT GATACAAGAAATGGGTTGGGAAATTGTTCGTCAAGAATCCATTAAACATCCTGAAAGACGAAGCCGATTGTGGAATACTAAGGAAGTATATGATGTATTG AAAAATAACAGGGGAACTGAAAATATGGAAGGAATAATGTTCGATATGTCTCAACTTCAAAAGGATCTATGTTTGAGCTCCGATTTGTTTGCAAAGATGC CCAAGTTAAGATATGTTGAATTCTGTGATAGGCATAATAATAATAGTAGTAGTAGTAATTATATCTACCTTCCCAATGGTCTTGAGTGGTTTCCTGATGA ATTGAGGCACCTTTGTTGGCCTACATATTGTGCTAAGTCATTGCCATCAACTTTTTGCGCTGAAATGCTTGTAGAGCTTCGCATGTCAAACAGCAAACTC GAAAAGCTTTGGGATGGTGTACAGAGTTTGGGGAATTTGAAGACAATTGACCTTTATGGATCCAAAGAGTTGGTTGAGGTCCCAGACTTGTCTATGGCAA CAAATCTTGATCAAGTAACTCTTAGTGAATGCGCAAGCTTACGTGAGGTCCATTCATCCATATTTTCTCTACCCAAGCTTAGGCATTTGTATTTAGATGG CTGCACACAACTTGAAAGCCTTACTACCCACATTCATATGATATCTCTCCAAACACTTTGGCTCTATAATTGTCCATCTCTCAAGGAATTCTCAGTTACA TCAGAGGAAATGGAGGAGTTGTACTTAAGTGGTACTGCTATTCATTATTTGCCTTCTTCATTTTTTAGGAACAGAAAAATGAAAGATCTGTATCTACAAG GTTGTGTCAATCTGAAGATTGATGGGAACGAGCTATTTGATGACCGGGTAATGGGATCTCTTACATATCTGGACCTTGATGGGTGCAAACAAGTGGATGC ATCAAACCTTTGGCATATCCTTCATGGGGTACCATCCTTAAGAACGCTACTTCTGAGTAACTGCTGCAACTTAGAAGCACTCCCTGACAACATTGGACTC TTGTCATCATTAGAGTTCTTAGACCTAAGTGGAAGCAATGTTGAGACCTTGCCTGCAAGTATCAAGAACCTTTCAATGCTAAAAAGGCTTTACATGGATG ATTGCATGAAACTTGTGTTCGTACCAGAGCTCCCGCCATCCCTAGAAAGGTTAGAGCTAAGCGGAACCAATGTCAAGAGCATGCCAACGAATTTCAAGAA CCTGTCCAAGCTAAAATGGCTTGAATTGGATAATTGCGCGGAACTTGTGGCTCTACTAGAGCTCCCTACTTCCATGAAATCATTAAGTGCTGTCAACAGC ACATCCCTGGAGTTGGACACAAACTTCACTCAACGGCTACTGCTACAACACATATCCTCCTGCTCACTCAAACATTGTAATAAGTATGCCACCCCTCATG AGTATGTTATGTTGCCAGGATCCCATATTCCGGAGTTGTTTAGAAGCACAACACAGACTACTTCAATCACTATTCCTTATCTACCACTCTCTGCCTTATG TGGTTTCCTTCTTTGCTTCATTCTTTCTAAGCCAAACTCATATTTGCAATTTGTTAAGTCTTCTTGTCATATCTATAAACAGGATAAGATATTTTGTGGG ACTAGTCTTAGGTATCTGAACAATGGTGACTTAATTTCAGATCATATCATATTTTGGTATGTTGACATTAAATACCTTCACAAAATACAAAAAGGTGGAG TGAATGATCATTACATCATGTCATTTGAATTTGACATCCAAGACAGCTTCTGTAAGTCGAGGAAGGAGGTGATTAAAGGGTGTGGAGTCCTACCAGTATA TGCCAAGGATTTGGAGTTGAAGCTGGATGGTATCATTACCAAAGATATTGTTCAGTTTCAATCCAATGCTCAAAGCTCTAATAACCAAGAACCAGTCCCA CTGACAGATACCCTATTGCAGGATGAAAAAAAGGAGTTTATTGTAAATGATTCCTGTGACCGCCTCGCGGGTGGAAGTCGAAGCCGGCCTAGTTTTCGGA GATTTTATGCTGCTGCATTGATGCTTCTCTTGATTGCTTCTTTGGCTAAGCAGTAAGCAGTATTTCCTGCTGAATACAGTGTTTGATATGTGATCAATTT GGACTATGAGGATGTCTCATCTCGCATGTGCTTTCAGTGTTCACACTAGCATTCATTTTTGTATACTTGTATTGTAGAGAAGTTCATACATGAGTACAAC TTATGACACTAGCATGTTGTTAATTATACAAGACAAGCTTGGAACCTATTCACAAGTTTTGTTGTGTTGTGATTTCATTGTTAGTACATATGTTTACATG GTTTGAAGTTGATTGTTAATTGTTCTATACCTATCATTGTAGACATAAGGATATGTTGTCTCAAATCATATCCCAAAGTCTGTAACAAACCAAT BLAST |
Tissue | pods |
Gene name | LI_gene_154804; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_374387
Blastp | Probable WRKY transcription factor 19 from Arabidopsis with 34.43% of identity |
---|---|
Blastx | Probable WRKY transcription factor 19 from Arabidopsis with 36.19% of identity |
Eggnog | mitogen-activated protein kinase kinase kinase(ENOG410XQGS) |
Kegg | Link to kegg annotations (AT4G12020) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_020216420.1) |
Pfam | Leucine Rich Repeat (PF07725.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |