Ll_transcript_376228

• Id Trinity: TRINITY_DN47710_c1_g1_i10
• Name Transcript: Ll_transcript_376228
• Sequence: AAGGTTGTCGGGATTTGTTGTACAAATGGGGTGGTTCTTTGTACAAGTTAGTCATTGGATTTATAAAACTTGTATGAAATTAGTGATTCTTAAGGACAAA GTTGAGTAATATAATAAGGAGTAAGCTGATATAAGTTTTATAAATTTGAAGACTAAGTTATACAATAATTAGTTTTCGAACTAAAATGTATATGGAGAAT AATTCCAGAAATTAAGTTGGTAATTTACTCGCTACTTTAAACTTCAAAGTGTGTTCCTTTTTTAGTTTTAGATCATGTAGGTTATATTGGTTGAGAAAAT ATTTTTAGTTAAATATTTTTGGTTTTGTTTTTGGTGTTGTTATTGCTATGTGGACTATTGTTTGTTGAAGAATGGCTTGTTTTGATGTAGATGTCGGAGC ATTTCAACCAAGACCTCTCACTTTCTGGTAAGATTCCAACAGGCCATTTCAATGATGCGTTTGAGTTTTCAGGAATTTGGCAGAAAGATGCAGCAAGTAC CAAAAGTCTCGCTTTTGATGGTGTCTCCATAACACTATACGATGTAGCACTTGATAAAACCCAGGTTGTTCTTCGTGATTATGTCAAACAAGCTGTTCCC TCATCATGGGATCCTGCTGCATTGGCGAGGTTCATTGAGAAGTATGGAACCCATGTTATAGTTGGGGTGAAAATCGGGGGAACCGATATAGTATATGCAA AGCAGCAGTACTCTTCTCCCCTGCAACCTGCTGATGTGCAGAAAAAATTGAAGGACATGGCAGATAGATTCTTCATTGATGGAGCTGGACAAAATAACAC AAATGATCGGAGATTTAATGGAAAGCTAAAGTTTATGAAGGACAATGAGCTAGGTTTCGTGGACATCCAAACTCGTTCCTACTCCGAATTAGAGGTGCAG GATATCAAGTTCATGTGCAAGAGAAAAGGTGGAAGTGGGAAAAATGACCTAACCCATAATGAATGGTGCCAAACTGTTTTGTCTCAACCTGATGTGATTT CAATTTCATTCATGCCAATTATATCTCTACTTAATGGAATCAATGGGAGTGGATTTTTAACTCATGCCATAAATCTATATCTTCGATATAAACCACCAGT TGGAGAACTGCATCAATTTTTAGAGTTCCAGATACCAAGGCAGTGGGCGCCTGTATTTGGCGATCTTGCCCTTGGTCCTGACAGGAAGCTACAGAGTAAA ACATCTTTGCAGTTCAGTTTTATGGGTCCTAAGCTTTATGTAAATACAACACTGATTGATGTGGGGAAGAGCCCTGTGACGGGCCTCCGGTTGTATTTGG AAGGAAAGAGAAGCAACCAATTGGCAATCCATTTGCAGCACCTTTCCTCCATTCCCAAGACCTTTCAAATTCAGGATGAGCTGGATGGAAATGTGTCTGA CGCCACTTCAGAACGCAGTTACTATGAGAAGGTGCAGTGGAAGAGTTTCTCTCATGTTTGCACAGCCCCGGTTGAATCTTACGATGACTACTCAGTTGTG ACTGGGGCTCATTTTGAAGTTGGAGATTCTGGCATGAAGAAAGTTCTATTTCTAAGACTTCGTTTCTCTAAAGTTGTCGGTGCAATTCGTGTCAAAGCTC CCGAGTGGGATGGTTCTCCTGGCTTGACCCAGAAATCCGGAATAGTCTCAACTTTGATCAGCACCCGCTTCTCATCTGCTGCACAAAAACCACCACCACG CCCATCTGATGTAAACATCAACTCTGCGTTATACCCCGATGGACCTCCCGTATCAACACACACACCTAAACTTCTGAAGTTTGTTGACACAACAGAAATG ACAAGAGGACCACAAGACTCTCCAGGCTACTGGGTTGTGTCTGGAGCACGGCTTTTGGCCGAGAAGGGTAAAATATCACTCAAAGTAAAATATTCCCTTT TAACTGTGATTCCACCTGATGAAGAGGCACTAAGTTATTGAAAATACCACATGAGATGGGTGTATATATGATAGTGTGTCTGATTTGTACATCTGCTCTA TTCATTTTAGGTTACTAGTTGATAGATATTGCCATTATTTGTGTGTCCTTTACAGTGCAGATCTCTTGGGAGAAATTCCATTATGTGGTTCTTGGAAAAG CTTGTATGATCATGCCCATTATGCCTTTTTGTGTGTATCATTGTATGTGTTTCCATTATGTTAGTGGCTTGGTTATGCAGTAACTATCAATGTTCTGCTC TCAAAAAATGAATGCATTGAGCTGGGAAGTGATCTTTCAATGGGGATTTGGGAAGTGGGAACCACATTAATGTCTTTG
• Tissue: pods
• Gene name: LI_gene_154812;
• Additional information: details;

Expression of Ll_transcript_376228

FPKM

• PAB: 0.8
• PNAB: 0.5
• PS1: 0
• PS2: 0.7
• PS3: 0.4
• PW1: 0.7
• PW2: 2
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_376228

• Blastp: MACPF domain-containing protein At4g24290 from Arabidopsis with 67.06% of identity
• Blastx: MACPF domain-containing protein At4g24290 from Arabidopsis with 67.06% of identity
• Eggnog: MAC/Perforin domain(ENOG410Y9MJ)
• Kegg: Link to kegg annotations (AT4G24290)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416771.1)
• Pfam: MAC/Perforin domain (PF01823.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;