Ll_transcript_376209

• Id Trinity: TRINITY_DN47710_c1_g1_i2
• Name Transcript: Ll_transcript_376209
• Sequence: CACGATTTGCATGTTCTCAGAACACTCAAACATAACAATGAATAAAATATTTAAAAACAAAACCATTTATTCACTCTGTATACCTTTTTCTTCTTCATTT CTCAACATCTCTATCCAAATTCGCTTTCTCCATTGCTTTTCCACTTCTCTGAATTCAACTTATTTAAATCAAAACAAAAAAAGAATAATCACAAAACATG TCAATGAAAAAGAAGGGAACGAATTCAAGAGAAGCATTAGAAGGTGCAGTGAAATCAATAGGGTTAGGTTTTGATCTATGCAACGCTCTTAGACTCAGAC ACTGCAAGAATTACTCACGTGACTCTAGGTTGATTTCTATCGACGATGATCACGTGCGTAATCTTGATCTACCAGGTTCACTTTCAATTTCAAATGTTCC CAAATCTATTAAGTGTGATAAAGGTGACCGTACTAGATTATGCTCCGATGTTCTCTCTTTTCAGCAGATGTCGGAGCATTTCAACCAAGACCTCTCACTT TCTGGTAAGATTCCAACAGGCCATTTCAATGATGCGTTTGAGTTTTCAGGAATTTGGCAGAAAGATGCAGCAAGTACCAAAAGTCTCGCTTTTGATGGTG TCTCCATAACACTATACGATGTAGCACTTGATAAAACCCAGGTTGTTCTTCGTGATTATGTCAAACAAGCTGTTCCCTCATCATGGGATCCTGCTGCATT GGCGAGGTTCATTGAGAAGTATGGAACCCATGTTATAGTTGGGGTGAAAATCGGGGGAACCGATATAGTATATGCAAAGCAGCAGTACTCTTCTCCCCTG CAACCTGCTGATGTGCAGAAAAAATTGAAGGACATGGCAGATAGATTCTTCATTGATGGAGCTGGACAAAATAACACAAATGATCGGAGATTTAATGGAA AGCTAAAGTTTATGAAGGACAATGAGCTAGGTTTCGTGGACATCCAAACTCGTTCCTACTCCGAATTAGAGGTGCAGGATATCAAGTTCATGTGCAAGAG AAAAGGTGGAAGTGGGAAAAATGACCTAACCCATAATGAATGGTGCCAAACTGTTTTGTCTCAACCTGATGTGATTTCAATTTCATTCATGCCAATTATA TCTCTACTTAATGGAATCAATGGGAGTGGATTTTTAACTCATGCCATAAATCTATATCTTCGATATAAACCACCAGTTGGAGAACTGCATCAATTTTTAG AGTTCCAGATACCAAGGCAGTGGGCGCCTGTATTTGGCGATCTTGCCCTTGGTCCTGACAGGAAGCTACAGAGTAAAACATCTTTGCAGTTCAGTTTTAT GGGTCCTAAGCTTTATGTAAATACAACACTGGTAAGCTTGTTTTATTTAAAGTTTTGTTTCATCCAAATGAGTTGCTGTTATATTTCGATCTTTGGCTTG TATTTTATATATTTTGTGCGCAGCAAGATTAAATACATGTCATGTATACTGTTAGTTTTCCTTTTGTTTTTCTATTAAAAGGTAGGGGCAGGCAAATCTG GTCCACCAAAGAGGCACTATGTAATTTTCTCTATTTTTGTTAGTTTAAACTTGAAACTTCTGAAATTAAAGAAATTATAACCTTAAGTTGGGGCTCATTG TCATTGGTATCCCTGTCTAGAGTTTAGTGCTAGGCAACAGATGAGAATAGTCTTTTTTCACATTTTCAGGAGTGTCCACTTAAGAGTTTAGAACTTCTTC TCTTAAGTGTTAGATATTACTCCCCAAGATTTGTGAGTTTATTGATCTCTTCCAGCAATAATAAGGGAAGGATAAGTGACAACCACAGCTGCCAACTCAT GAATCAACTATTAGATTAAGCACCATTTTCTCAGTGATTTAGTTGTTCCTTATATGTTATAGAATATCTGGTGAAACATTAGTGAAAAAACTAATGTTTC ATCTAATCTCCTTTCTTGAATGAACCTTCTATTATCATATAAAACTGTGTTAACTTGTTTGTGCCATGAAACTCCGTTAGCCAATAGTTAGATGCAATTA TGAAGTATCTGCTATTTTTTATTTATTTAATTAACCATTGTTGGAAGTTATCATTCTCAAAATTAATGTGGCGATTTAGACATTATTTGAATTTATGTAC AGATTGATGTGGGGAAGAGCCCTGTGACGGGCCTCCGGTTGTATTTGGAAGGAAAGAGAAGCAACCAATTGGCAATCCATTTGCAGCACCTTTCCTCCAT TCCCAAGACCTTTCAAATTCAGGATGAGCTGGATGGAAATGTGTCTGACGCCACTTCAGAACGCAGTTACTATGAGAAGGTGCAGTGGAAGAGTTTCTCT CATGTTTGCACAGCCCCGGTTGAATCTTACGATGACTACTCAGTTGTGACTGGGGCTCATTTTGAAGTTGGAGATTCTGGCATGAAGAAAGTTCTATTTC TAAGACTTCGTTTCTCTAAAGTTGTCGGTGCAATTCGTGTCAAAGCTCCCGAGTGGGATGGTTCTCCTGGCTTGACCCAGAAATCCGGAATAGTCTCAAC TTTGATCAGCACCCGCTTCTCATCTGCTGCACAAAAACCACCACCACGCCCATCTGATGTAAACATCAACTCTGCGTTATACCCCGATGGACCTCCCGTA TCAACACACACACCTAAACTTCTGAAGTTTGTTGACACAACAGAAATGACAAGAGGACCACAAGACTCTCCAGGCTACTGGGTTGTGTCTGGAGCACGGC TTTTGGCCGAGAAGGGTAAAATATCACTCAAAGTAAAATATTCCCTTTTAACTGTGATTCCACCTGATGAAGAGGCACTAAGTTATTGAAAATACCACAT GAGATGGGTGTATATATGATAGTGTGTCTGATTTGTACATCTGCTCTATTCATTTTAGGTTACTAGTTGATAGATATTGCCATTATTTGTGTGTCCTTTA CAGTGCAGATCTCTTGGGAGAAATTCCATTATGTGGTTCTTGGAAAAGCTTGTATGATCATGCCCATTATGCCTTTTTGTGTGTATCATTGTATGTGTTT CCATTATGTTAGTGGCTTGGTTATGCAGTAACTATCAATGTTCTGCTCTCAAAAAATGAATGCATTGAGCTGGGAAGTGATCTTTCAATGGGGATTTGGG AAGTGGGAACCACATTAATGTCTTTGCCATGGTTTATTCGTGGTTATGTTCATGTAGTGTTTTTTCCCTTAGTTTTGTAGAGAACTAAAATTATAAAGAG TGTAATATTTATTTACTGTCAGTGTAAAGATTTATACGCAGCCAATACATTATACACTAGTTATTTGTATTTCTTTTTTTGAAGAGTTAATGATGATAAA ATATGAACGGTGGATAATGCAATGATGATGTATAAA
• Tissue: pods
• Gene name: LI_gene_154812;
• Additional information: details;

Expression of Ll_transcript_376209

FPKM

• PAB: 3.3
• PNAB: 0.1
• PS1: 1.4
• PS2: 0
• PS3: 0.3
• PW1: 2.5
• PW2: 3.6
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_376209

• Blastp: MACPF domain-containing protein At4g24290 from Arabidopsis with 62.4% of identity
• Blastx: MACPF domain-containing protein At4g24290 from Arabidopsis with 62.13% of identity
• Eggnog: MAC/Perforin domain(ENOG410Y9MJ)
• Kegg: Link to kegg annotations (AT4G24290)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416771.1)
• Pfam: MAC/Perforin domain (PF01823.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;