| Id Trinity | TRINITY_DN47710_c1_g3_i7 |
|---|---|
| Name Transcript | Ll_transcript_376219 |
| Sequence | AAAATAGATGTTCTCCATTGGAGTTGTGATAAATTATAAAATAATGTGTGAGACCCAAATAAGAATGAAAAAGTTGTTCTCCATTGTAGACGCTCTTAGT TATATTGGTTGTAGTACTTTTTAGATTTGCTAAATTGGGGGATTACACTTTCAAATGATACCATAATCTTACTGAATATAGGTTTTGGTACTTTTTAGTT TTTTAGGTTTCTAATTTCTATAGAATCAAATTCTAGTTTTGCATTAATATAGAGACAGACACGAGTTATATTGTATCACATGTTGATTCATTGTAGACTT GTAGTAATTTTTCTACTTTTCAAAATTATCAGAAAATCGGTGGGTTATGATTCAGTGAAGGACTTTAAGTCTTCAAGCATTTTGGGTAGATCCTCTTTTG ATGCAATAACTGCAAATGCAAGTTATGACTTGAAAGTCAATATTCCAGCTACAAGAATCTTGGCAGGCAACAGTTCATGTAAAGATCCCAGAGAACTCTC TCAACGAAGTATTTCCAACATGAAATTGCATTTTGCTGCTAAGAGTGCCCCAACTAGCATACTCTGTAGTCCTGTTACTAGTCCTCGTAGGGCAAGTAAT GCAGATTTATTTGATCCTTCGGTTGATTTCCATCAAGAGTTTAATGATATTTTGAAAGTGTCACTGGCTAGAACTGTTCGAAGTCCAGACCATTCTCCTC TCCGTAGCCCGCAGAGCCATAGCCCTTACCTCAGTACTAACACCGAAGATGGATCTAAGCAACCTAAATATTGCTCCAGAGTGTGGCCTGAAAATAACCA TGTTGATGCTCACCCGTTGCCCCTTCCTCCTAAAGCTTCATCGCCGATACAATCATGTACACAGCATCAATCAAGTATCATGCATCACACTACAGAAAAT TCACCTTCAATGAAAGGTCAATGGCAGAAGGGAAAACTTATCGGACGTGGATCATTTGGAAGTGTTTATCATGGAACCAACCTAGAGACTGGAGCCTCAT GTGCTATGAAAGAGGTGGATTTGATTCATGATGATCCTAAGTCTGCTGACTGCATAAAGCAACTAGAGCAGGAAGTCAGAATTCTTCGTCAACTAGACCA CCCTAACATTGTGCAGTATTATGGCAGTGAAGTAGTTGGGGATCACTTGTACATATACATGGAGTACGTACATCCTGGATCAATTAATAAATTTATGCGT GATCATTGTGGAGCTATGACGGAATCTGTGGTTCGCAATTTTACACGCCATATTCTTACTGGACTGGAATACTTACATAGTATGAAGACGATCCATAGGG ATATCAAAGGTCCAAACTTGCTGGTTGATGCATCGGGCACTGTCAAGCTAGCAGATTTTGGCGTGGCAAAAATTGTGAGTTTTTTAAGTTCTATTTACAT TTAATTATGTTTAGATATATGCATACTAAGCTATTCTTCTCATTTACACTTGTTAACTTGTCTCTTTAGTTTTCATAGTTAGCTTATCATTGAATCCAAC ATCTTTTTTTTTATTGTTTCTGGTGGTCTTGCTATTTGAACGATCTGCTCTTTCCAGCTGACGGAGAAATCATATGAACTTTCATTGAAGGGGAGTCCCT ACTGGATGGCTCCAGAGGTATTTTATTAGTCGTACAGTAACGTATTATCTGCAGAATTTTAGACGGGCAATGAGCAATGACATGCCCCTTTTTACACTAA TTTTTTCATTGAAGCTCATGATGGCTGCCATAAAGAAAGAATCCAGTCCGAACCTTGCAATGGCCATTGATATATGGAGCTTAGGGTGCACCGTCATTGA GATGCTGACAGGCAAACCTCCATGGAGCGAATTTCAAGGGGTAAGGTCATGATTATGCTTGTTAACTCATTAAACTCAAGGATACACTCTAATTTGTGGA TTTTATATAAGTCCGATGAACTCTCCCCCCGCGTTAGATGGTGGGGCATTTGTTCAAAACATATATATTATCTATAGCAGTTATCCACTTATCCTTTTCC CGTATATTTTCATGGATTTAAGTAATAAGAAGAGCACTACTTATGCTATACAAGTATACATTACATTCATGCTCCAGGGATTAGGACTTAATAAAGTTGT GTTGAATTAAGTTTAAATTAACCAATTTGTAGTTTGCAAATATTCATATTTTTCCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_154814; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_376219
| Blastp | Mitogen-activated protein kinase kinase kinase 5 from Arabidopsis with 48.86% of identity |
|---|---|
| Blastx | Mitogen-activated protein kinase kinase kinase 5 from Arabidopsis with 48.86% of identity |
| Eggnog | mitogen-activated protein kinase kinase kinase(ENOG410XQGS) |
| Kegg | Link to kegg annotations (AT5G66850) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416747.1) |
| Pfam | Protein kinase domain (PF00069.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |