Id Trinity | TRINITY_DN47710_c1_g3_i8 |
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Name Transcript | Ll_transcript_376221 |
Sequence | ATAAGAAAGAAAGAAACAGCTAAGGTGTTTCCTCTTCATTTTCTTCGCACTTCTTTGGTTTTGCAATTAACATTAGCCACCACTAACCCTCTCATCACTC TTACTTCAACAAACAATTCTTTCAAATGAGTCACCACCCTAACAAACAATTCTCTCACTCACCGTTATCACACAGTGACGGTAGTTTACGACAAACACTT CAGCAGCGTAGGCTTACAAGGCAGAGGAGGCTCCGTTACTTGACGGACCAAGACGCCGGCGTCCATTCCACGTCATCTTTACCGGCGTCTCCTATTCGTT CTTTTAACTCCGGTGGTTCTTATTCCGATCACTGGTCTTCTTCTGCTGTTCCACAACCGTTGCCTCTGCCGGAAACACCGTTGACCCATCGACCCGAATC AGCTACTCCCAATTCTGGATATTATGCCAATATCGGATCTCCTTCTTTTGAACATCATGCCTTTGCCTTTTCCAGAAAATCGGTGGGTTATGATTCAGTG AAGGACTTTAAGTCTTCAAGCATTTTGGGTAGATCCTCTTTTGATGCAATAACTGCAAATGCAAGTTATGACTTGAAAGTCAATATTCCAGCTACAAGAA TCTTGGCAGGCAACAGTTCATGTAAAGATCCCAGAGAACTCTCTCAACGAAGTATTTCCAACATGAAATTGCATTTTGCTGCTAAGAGTGCCCCAACTAG CATACTCTGTAGTCCTGTTACTAGTCCTCGTAGGGCAAGTAATGCAGATTTATTTGATCCTTCGGTTGATTTCCATCAAGAGTTTAATGATATTTTGAAA GTGTCACTGGCTAGAACTGTTCGAAGTCCAGACCATTCTCCTCTCCGTAGCCCGCAGAGCCATAGCCCTTACCTCAGTACTAACACCGAAGATGGATCTA AGCAACCTAAATATTGCTCCAGAGTGTGGCCTGAAAATAACCATGTTGATGCTCACCCGTTGCCCCTTCCTCCTAAAGCTTCATCGCCGATACAATCATG TACACAGCATCAATCAAGTATCATGCATCACACTACAGAAAATTCACCTTCAATGAAAGGTCAATGGCAGAAGGGAAAACTTATCGGACGTGGATCATTT GGAAGTGTTTATCATGGAACCAACCTAGAGACTGGAGCCTCATGTGCTATGAAAGAGGTGGATTTGATTCATGATGATCCTAAGTCTGCTGACTGCATAA AGCAACTAGAGCAGGAAGTCAGAATTCTTCGTCAACTAGACCACCCTAACATTGTGCAGTATTATGGCAGTGAAGTAGTTGGGGATCACTTGTACATATA CATGGAGTACGTACATCCTGGATCAATTAATAAATTTATGCGTGATCATTGTGGAGCTATGACGGAATCTGTGGTTCGCAATTTTACACGCCATATTCTT ACTGGACTGGAATACTTACATAGTATGAAGACGATCCATAGGGATATCAAAGGTCCAAACTTGCTGGTTGATGCATCGGGCACTGTCAAGCTAGCAGATT TTGGCGTGGCAAAAATTCTGACGGAGAAATCATATGAACTTTCATTGAAGGGGAGTCCCTACTGGATGGCTCCAGAGGTATTTTATTAGTCGTACAGTAA CGTATTATCTGCAGAATTTTAGACGGGCAATGAGCAATGACATGCCCCTTTTTACACTAATTTTTTCATTGAAGCTCATGATGGCTGCCATAAAGAAAGA ATCCAGTCCGAACCTTGCAATGGCCATTGATATATGGAGCTTAGGGTGCACCGTCATTGAGATGCTGACAGGCAAACCTCCATGGAGCGAATTTCAAGGG GTAAGGTCATGATTATGCTTGTTAACTCATTAAACTCAAGGATACACTCTAATTTGTGGATTTTATATAAGTCCGATGAACTCTCCCCCCGCGTTAGATG GTGGGGCATTTGTTCAAAACATATATATTATCTATAGCAGTTATCCACTTATCCTTTTCCCGTATATTTTCATGGATTTAAGTAATAAGAAGAGCACTAC TTATGCTATACAAGTATACATTACATTCATGCTCCAGGGATTAGGACTTAATAAAGTTGTGTTGAATTAAGTTTAAATTAACCAATTTGTAGTTTGCAAA TATTCATATTTTTCCCCCTCTTTCTTAGCCTCAAGCTATGTTCAAAGTACTGCACAAATCCCCAGATATACCCGAAACATTATCTTCAGAGGGACAAGAT TTCCTTCGGCAGTGTTTCAGAAGAAATCCTGCAGAGCGACCATCGGCCACAATGCTTCTTACACATGCCTTTGTACAAAATTTGCATGATCAAGATGTTT TGGCTCATTCACAAGGCTATCCCAGAGCCGACCCAGGACCAGAGGTCCATTTTCGTAGTCCTGACTGCAGTCCCAAAAAGGGCCCTGATGTAGCGCCACT GGACTACAGTCCCAAAAAGGGCCGTGATGTAGCGACCCTGGACTGCAGTCCCAAAAAGGGCCGTGATGTAGCGTCACTGTCAGCCTCCATTGGCGCACGG ATTATAAACAAAATTCATAATTTCATTGGTGATACTTCCAAAAAGTATACTACTGAAAAAGCTAGCCATACTCATTGTTAATCGCTTCAGTTGAAAACTA GTACACTCAATTAGGTGTCTGTTCCAAATTCCAGCAAGAGTCATCAGGAACCTCTGAAGCATGGCATCAGCTGAGATTTTGATAAAATATCAGAAAGATA TTTAGTAGATATTTAGTATATCAGGGATTTAGAAACTACTCATTATTGATGATAGAAATGTATAATCTCAAAGCTTGGGTGGTAAAAGAAATGATATAGT TCCCATATGTACATGTAAATTTAATGAGTGTAATATATATTTTAAAGATTTATACATAGTAAATGTATTATTCATCATGTATCTATATTACTTTTTTGAA GAGTTAATGATAATTAAAAATGAATGTCGGATAATGCAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_154814; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_376221
Blastp | Mitogen-activated protein kinase kinase kinase 5 from Arabidopsis with 42.38% of identity |
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Blastx | Mitogen-activated protein kinase kinase kinase 5 from Arabidopsis with 49.33% of identity |
Eggnog | mitogen-activated protein kinase kinase kinase(ENOG410XQGS) |
Kegg | Link to kegg annotations (AT5G66850) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019416747.1) |
Pfam | Protein kinase domain (PF00069.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |