| Id Trinity | TRINITY_DN47712_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_375741 |
| Sequence | AAAACCCTGATTGAAAGGGAAAATTAGAACATTTTGAGAAAATAAGGGATCATTGAGCAATTATGAAACATCTGAGTTCCAAATTTCCAAAACTTTTCTG AGAATAAGAAACGTATTTTCATCGAACACAATCCATATCTCATGATCTTTCAATCTGTTCATCGAAACATGTTTGGGATTATTAAATCGATTTTTGTGCC TACAAACACTTGATCTTGTTTCAATTCTCACTCTTCTCTAACATGCTCCTCGTGATTCTCTTATCTGATGCATTATACCTTTAACTACCGATTCTTCTTT AATTTCTTTCCATTTTTCTATTAATCACTATAAAGCTCTACCTTTTATGCTTTTTTCTTATTACAGATCAATAATAGTCAGGATCTTTCTATGTGGATAG ACATAGACACGGGAGAAGGCAGCACTCAACTTCCAAGCTTCCTTTTAGAATAAAAGGGAAAATTATTATATCATAAAAAGGTTGTAGATTTCTTGCAATG GGTGCTCCTAAGCAGAAATGGACTGCAGAAGAAGAAGCAGCGCTGAAAGCTGGAGTAGTCAAACACGGGGCCGGAAAATGGCGCACTATACTTACAGACC CAGAATTCAGTTCTGTTTTGCGCATGCGTTCTAACGTAGATCTCAAGGACAAATGGAGGAATATAAATGTCACAGCAATATGGGGATCCAGGCAGAAGGC AAAGCTTGCTCTTAAAAAGAACCTACCAGCCCCCAAAATCGACAATATCCATATGTCCTCGAGTATTGTAGTTTACCATGCTGAAGAAGTTGCTGTTACT AAGACTTCAGCAGCTTCTGGTGGAACATCTTCTACTTCAAAAGAACAAATACCAAGGTTACAGAACTTCCACTTAAGTATATCTTTCATGTGCTCTTTAG AGAAAATTAATGGTCTGCGGTGTTTGGTTGGTTTATCCTGTTCTTGAGTAGCACATGGACAAACATCACATGTTGTCGATATTACATCCCTTTCAAGTAA CTAGTTCTAAGATTGCGTAAATCAAAGTGCTGGCATACCAATCTCCTAAATGAGTAAATAACTAAACCAAATTGCTAGCATTTTTTGCTTTTTTTTGTGT AGCTTGGAGTATCTGATATCTTGATTCTTCATTATTTATTGATTTTCATGATGACTTTGCTCCAATCATGGGAAAAATAAACTAAAAAAATATAACTCAG TTACATGTATATTGGTTCCAATTACATTTAAAACTAGTTATCTTCTTTTCTGCCGCTTCTGATACATCCCATCAAGTTTGTAAATTTTACGGCAACATGT GTTCTGGTTGTGGCTGCAAATGCTTTTTAATAATGGCAGGTTGGATACTCTTATATTAGAGTCTATTATCAAGTTGAAGGAGCCAAAGGGTTCTGATAGG GCTGCTATTACTGCTTATATAGAGGATCAATACTGCTCTCCGCCGAACCTCGAAAAGTTACTATCAACAAAACTGAAGCATATGGTGGCAAGCGGCAAAT TAGTGAAGGTTAAGCGTAAGTATATGATTTCAACAAATCCATTAAGCTCTGAGAAAAGAAGATGCTCTTCCTCCTTACTCCTTGAAGGAAGGTCCAAAGA TTCTCCTAAAGCAGAGAAGACTAGTGTCAACAACCTTTCAAAATCCCAAATTGATGCAGAGTTATCAAAAATTAAAGGGATGACCGCTCAAGAAGTGGCA AGCGCGGCTGCAAAAGCAGTTGCAGATGCAGAAGCTGCTATTGCTGAGGCTGAGGCAGCAGCTAGGGAGGCAGAGGCTGCAGAAGCTGAAGCGGAGGCTG CACAAGTTTTTGCAAAGGCAGTAAAGAAGGCATTTAAATGCAAAAAACGTTATCCTTGATGGTGTCAGCTTCTGCATGCTGAGGTGAAACACTACATGGC TTGAGATCATAGTTCTGATGCTATGCTTCCTGCACGTATTCAATCTGTACATGATTTAGTCTTGTAAATCTGGAACATGCGGGAATGATCCATGAAACAT TTTGTCCGGAGTCAGAAAGAGCTTATTGTTTATTACTATTTTCCCCTTACTTTTAAACAAGACAATGATGCCAGGGTACAATCTTATTGTAAGTGAAAAT TACAGTTTTTAGTTGTGTTCATTAGTGGTATTGTAGTGTCATTGTCTCGTGGGTCCTTTTTTATAAGTTCATAAATTGTCATTGTCTCGTGGATCCTTTT TTATAAGTTGATAAATTACTCCGGTGATATCAAGTGTTTGGAACTGTACATAATGAGGTCTTGTTAGATTGTTTGGCCTGAGCATTGTTGTCTGTTATGT TTCTGAATTAATAATAGTGTGAAAGATAGGTCTCCTTGTGATCCTGAGTTAAATCTTGTAAAATTATCTGTTTGTGGGATAAGAATACGTCCATTTATCT TCCTTAGACCCATGAGGTGGAAACTTTGTGCATTGGATAGCCTTTTTTGTTAACCGTGAAAGTTGGATCCAGTCTAAGAATTTTGTTCTTTGCAATTGGG AACATTGCATGTTCTACTTAGGAATACTTTGCTGTTAAGACTGCTCAAACTTCTTTGTCAATTGAAGTTAAAATAATCTCTCTCATGAATGCTATTGAGT GTAGTTATGATCTAAACTAAGCATGTAATGCTAATATAACTACTTTTTTTTATAGCTTAACCAGACATATGGACATGA BLAST |
| Tissue | pods |
| Gene name | LI_gene_154822; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_375741
| Blastp | Telomere repeat-binding factor 2 from Arabidopsis with 52.05% of identity |
|---|---|
| Blastx | Telomere repeat-binding factor 2 from Arabidopsis with 81.82% of identity |
| Eggnog | DNA binding double-stranded telomeric DNA binding protein homodimerization single-stranded telomeric DNA binding transcription factor(ENOG4111CH3) |
| Kegg | Link to kegg annotations (AT5G67580) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421379.1) |
| Pfam | linker histone H1 and H5 family (PF00538.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |