| Id Trinity | TRINITY_DN47712_c1_g3_i3 |
|---|---|
| Name Transcript | Ll_transcript_375764 |
| Sequence | CATTGCACACCTCAACTGTCCCCTTCCACAGCAGTGGTGCTGGGCTTGCAGCTGCAGTAGAGGTTTATTTTCCCCAGTCCGGAGAGAAATGAATAAGGTT TGCTGCAATGATTTGACAGTAGCTTTGGTGATGGACATGGCTCAGGTGACTAGTTGGGCTTGATTTGGCACTTTCTGGACTTCTGGGCTTGCGGGTTACT TCTGTTGAGGTTTGTTGTAGTGGTTTGACTAAGTATTCTGAGAGGTGATTTGTGATCGGTGGAGAGTTACATGAGACAAGTGCTACTTTGGTCAGCGATG GAGGTCTCGAATGGTGGCAGATGGGGTGGTTGGTGGAGGATGTGGTTCATGGTGGTCCTGGTGGAAGACATGGTCTGGTTGGTGGTGGTGTTGCATATGC AGAGTGGACATCAATCACAAACAAGGTGAAATGGTGGCAGCAATCTGATTGGATGGAGTTTAATGGTGGCTCAAGGGAAAGACAACAGAGGCATGGATGA GATGATCTGGCTTGGAGACAGGCATAATCAGGTTTGGATAGAATTGACAATGGGGCGAGGATGGAGAGTTTGGAGTGGTGATATGGGTTGTGTGAGGTTG GAGAAGAGGTAGGGAGAATTTAATTAGAATGATTTTGGTGTTATCAAAATTTAGCCAGTTATCATCTCAGTCATTGGTCTATTTTATTTTTCGTGCTGAT CAATGGTTGAGATTTAGGTCCATGAATCTCCCTAACTCCCTAAGGTGTAGCATAATGTCACCTACAACCGATAAGAGAACATTTACTGAAAAATGCTATA TTTCGAATTTTCTAATGCAATAGTCCTACAAGCCCAAGCCCATTAGTGGTATCTCAATAACCTAATATCTTTTAACACTTCAAAACCAGAGAACAAGTAT GATCTAGCTCCTGCTGCACAATCACAAGACAGAACCAAGAAACAGAGCAAAACCCAGCAACCAGAAGGTTCAAAAGATGCATCTTCTTAAATCTGAACCA CCAGTAGGGTAAGAAGGGGTCAAATGGAGGTCTCGGTTTTTTTGGGCCTTTTGGTACTTTAGATTTCTGCTGGGTTGGGGCTTTAAGTTTTAGAAACAGC GGAACTGGGCAACTCTCCTGGCAATTTACAATCTGTCGTAGCAATTCCAGTGGATCTCACCAAAACGTGCTTCTTCGGTGTGATTGGGAACGAAGCAAAG ACAATAGAAATGTTGAGTACTCGTATATTAGAGGCCATTGTCCATTTGAAGGAGCCAAATGGTTCTGACAAGGTTGCTATTGCTTCTTACATAGAGGACA ATTACCAGTCTCAATCAAAGCTCAGGGACATACTGCCAGCAAAACTGAAGCATATGGTGGCAACTGGCAAAATAATCAAGGAAAAGCATAAGTACAGGCT TGCTCCAAGTTCAAGAACCAATGAGAAAAGAAGAATCTCTTCTGCATCAAACCTGGATGGGAGGGCCAAAGATTTTCCAGAAGCAGAGAAATATGATGAT AACATCTGTTCAAAACCCAAAGATTCTCTAGGTGCAGGGAAGAGTGACGATAAAATCATCCGTTCAAAATCCCAAAATGACGGAGAACCATCAAAAGCAA AGGGAATGAGGGTCCGAGAGGTGGCTGCTAAGGCTGCAAAAGCAGTTGCTGAGGCAGAAGCTGCCACTGCTGAGGCTGAGAGAGCCGCTAGGTTTGCAGA TGAACTAGAAGCTGAAGCTGAGGCTTCTGAAGTGATTCACCAAGCAATATTGAAGGCATTTCAAAGCAAAACATTTCGTCTTTGGTAGCTTCCTCACTGA GAAATCTATGCTGATCCCTTCAAATGTGATGATGGTGTGGACTTCTGCTTGTGTCTCATCACAGAATATTGGCTTGATATTATAGTTCTGCTTCTGCACT TCCTGCCTGCATTTTCTAACTGTACATAATAATTTTGACACTTGAACATCTTTTCAGGACTCAGTAAGAGCTTATATTTTTTCAAGCTTATTCTCATTTG TTAATGGAAGACAATGAATTTAGGGGAGGGGTACAAAATTACCAGCAGAAGAATGGGATTGTGGGAATAACAATGAAGTGCTGTATTGTTTAGGATTTTT GAGGTGCTGTAATGTTTAGGATTATGGATTGACTTCAACTGAGCGTAGATGAAATAAAACATTTTTTCCTATTGTTTAGGATTATGGATTGTCATTGACA TACAGATCATCTTTACAAGGATGCTTTGTTCTAAGTTATTGTTACATTATTCTGGTTGTGTATATTGTCTTCCTTTTGAGATTTGTCAAAATTATATTAT GAACATAAGAGATAAAAAAATATGATTCGACCTCACCCATTTGAATGTAGACGATAATAGTGGAGCCCGTGAATTGATATGTATTTGAATCATAGGAGTA GTCATCGGAGATATGCTTATATTGGTGACATTGTTGTTGCTGTAATAAAGGAAGTTGCAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_154824; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_375764
| Blastp | Single myb histone 1 from Zea with 46.84% of identity |
|---|---|
| Blastx | Single myb histone 1 from Zea with 44.09% of identity |
| Eggnog | single myb histone(ENOG4111SQS) |
| Kegg | Link to kegg annotations (100274000) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019434703.1) |
| Pfam | linker histone H1 and H5 family (PF00538.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |