Ll_transcript_375814

• Id Trinity: TRINITY_DN47713_c3_g1_i1
• Name Transcript: Ll_transcript_375814
• Sequence: GAAATGACAACCACATCATTGTTTCGCTTATCCTTTCTTCTTTTATTCATCTCTCATGCATTCTCAGATCTATGCAACCCTCAAGACAAGAAAGTTTTGC TCCAAATCAAGAAGGACCTTAACAACCCTTATCTTCTAGCCTCATGGGATCCTAACACTGATTGTTGTGACTGGTACACCATCAACTGTGACCCCAAAAC GCACCGTATCAATTCCCTCACCATTTTCTCATCCACCCCAGACACCAATTTCTCGGCCCAAATTCCACCCTCAGTGGGCCTACTCCCTTACCTAGAAACC CTAGAGTTCCACAAATTACCCAAGCTCACGGGCCCACTTCCACCCGCTATCACAAAACTAAAACACCTCAAATTTCTCCGGATCAGTTGGACCAACCTTT CGGGCCCGGTTCCCGCATTTTTATCCGGGCTCACAAACCTGACCTTTCTCGACCTATCTTTTAATAATCTAACCGGTTCGATCCCCGGTTCGCTCGGAAA CCTCGAAAACCTTGACGCAATACATTTGGACCGGAACCACTTAACCGGTTCAATCCCTCCTTCTTTCGGCTCATTCAAATCAAACCCGGATATCTACCTC TCCCATAACAACCTCACAGGAACCATTCCAACATCTTTTAAGAACCTTAAATCAAACGTTATTGACTTGTCACGTAACAAACTCGTTGGAGATGCTTCCC CGGTTTTTGGTTCGGCTCTGCAGAGAGTGGACTTGTCGAGGAACCAATTCTCGTTCGATTTGAGTAAGGTGGAGTTTGCATCGAGTTTGACATCGTTGGA TCTGAACCATAACAAGATTTATGGAAATATTCCACAAGTGTTGACTACACTGGATCTGCAATTCTTGAACGTGAGCTATAACAGATTGTGTGGTCAGATT CCAGTGGGTGGGAAGCTTCAGAACTTTGATGTTTATGAATATTTTCATAACAAGTGTTTGTGTGGTTCTCCTCTTCCTAGCTGCAAGAACTGATATTTTT CTATATACCTATCACTATGTATGCTTGTACACTTGTACCATTTATTTGAATCAGATTTTCTACTGAACCAGTACACGTTATAATGTGTTGGGGTACCTTT GTCTCGACCCCTACTATTTGTGGATCATGATTAGTATGGGAAGAAAAAAAAGACATTTGTGTAGTGTTTTTAAATGGTTTTTTCATCATAATTGTGAAAA AACACCAATAATATGTGGTTGATGTGGCCAATAAATGTGATTATGAAGTTATTAATATATGTTGTCCCAAACGAATATCAACATGTCACATCAATCAAAA AAAATTAAACATTCATGTTTTTATTTATTTTTTCTTTATTCTGATAGGCTTGGGACATAGTTGGAGACATATTTGTGAATAAGAGATTTTCATCCATTAA TATTCTTCCCTCAATTATATGGAATGAATATCTCTTGTCCCCATTGATATACCCATTTGTGTACCAAACCAATCAAAATGTCTCACTTTATTGGAAAAAT AAAAATAAAAACATAAAATTATTTTTTACACATTATTTGATATCACTCTATTAGATAGGGACATGGGGACAAGGTCTTTTTGGGACAGAGGATCCCGTCC AATACCAGATTTGGAAAGAGGGTGTATTAGTATTATCCCAGAATACAATTTAAAGAAATACAGTTAATATTTGAGTCAAATTGGATAATTTTACAGATAG GAT
• Tissue: pods
• Gene name: LI_gene_154834;
• Additional information: details;

Expression of Ll_transcript_375814

FPKM

• PAB: 198.7
• PNAB: 88.8
• PS1: 51.5
• PS2: 9.3
• PS3: 21.2
• PW1: 291.8
• PW2: 375
• PW3: 121.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_375814

• Blastp: Polygalacturonase inhibitor from Pyrus with 68.71% of identity
• Blastx: Polygalacturonase inhibitor from Pyrus with 69.97% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419773.1)
• Pfam: Leucine rich repeat N-terminal domain (PF08263.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;