Id Trinity | TRINITY_DN47714_c3_g1_i3 |
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Name Transcript | Ll_transcript_375388 |
Sequence | CACAAAGCAGTAAGAAGGTGACTCACCAATAGGGGCCAACTCTCATCATCCCAACGTTTACAACTTTATTATATTCCATCAATCTTCTACTTTCCTCTAT CTATGTTATTATATTTTTTTGTCCACATATCTTTTCTCCATTCTTTCACCTCTTCTTCTCTCCCAATCTTTCTCTCTACCCGTCTTACATTTCCTTCTCT CACTCAACCACTTTCCCTAACATGGCTGCTTTTGCTCTTTCCCTCCTTCTTTTGCCCTTATTCACAACCTATACTAGTGGGTCTTGGTGTGTTTGCAAGG ATGGGAGTGACACAATACTGCAGAAGACGTTGGACTATGCTTGTGGTGCAGGTGCTGACTGCAACCCTCTTCATCAAAATGGACCTTGTTTCCAACCCAA CACTGTGAGGTCTCATTGCAGCTATGCAGTGAATAGTTATTACCAAAAAAAGGGTCAAGCTCCTATGTCATGTGACTTTTCTGGAACAGCCACTGTTACT GCATCAGACCCTAGCTCTAGTGGTTGTTCATACCCTTCAAGCGCCAGGTTTGTATTTGATCCATTAATGTTCTTTGTTGGTGTGCCTTATTTTGCTTAGT TTAATGTGTGTCTTTTTTTCTTTCTTTTTTTACTGAAAGATTACTGTGAATACTCAATTTTGTCCGGCCCAAAATACATTTTCAAGAAAATTATAAAATA TATTTTGTTACGACTAAACAAGTCGTGCAGCCGAAAATCGGGACTCGGGGCGCGATAGTTAATGAAGGAGTAGTGGAGTGGTGAGGCTATGTAGCACTTT GCATAGATAGATTAATATTCACAAAAGAGGGTAGGGGTGGTAGGTATTGCTTTGCAAATTGGCATATTCGTAACATGATAATGATAAATGATAATGTGCC TAATGTCAATAGTGTTCTGCATTCATATAACAACAATTTTGTACCCTTGGATGGTTGTGACAGTATGAAATCACTAGATAGAAATTATTAATAAACCTAT CATAAGTAACAGTGCCCGTATAAAAACAAAAAATATAGGAGTATACGAATTTCATATTCACATTTGCATAAAACAATTGTGTTTCTTTCTCTCTCTTTTA TATATTTATGTATATATATATATATATATCCTAAAGTGAGGACACTATAACTAAATTGCAGTTGGTAACGCCAGCAAAAACCAGTACAAGTGATAATGAT ACAATGAATGTTGGGATAATAAGCTTATCTTCAGGACTAGTAGTAAAGTTATTGCAAGAAAAAATATGGTACTTTTAGAAATAAATTCAGCTTCAGTACC TTATTTTGAGGTGCAAATTATAGATGAAACCTTTCTTTCATTTCATTTGAATTTGAGCAATATATTAATGCCATTGTAATGTCTAATAGCCGTTGCAGTT GGATAAAAGATGGTGCAATAATTGGGGCTGGTGCCTTCAAAAAGTTTGAAACCAAAATCAATTTTTTTTTAAAAAAGGGGCCACCATCATAAGAAAAGAC AAAGTTGTCCCAATTGATCACCCCTTATCATACTTTTTTGCTCTGCTTTTTTGGGAAATAAATAAATAAAGCAGTCAAGGATGCACTTATTATATAGTCA AAAAGTGGTGTTTGAGTGAGTAACTTTGAAAATTTTGATGACAGTAGTAATAATAGTAATATGTGTGAAATGTGAATCAAGGGCATAAATACTACTAGCT TTGAGATATGGACCTACATCTTTTGAAAAGTTAGGATTTTTTTGATGTTTGTGTATGACTAATTCACTAATGTTGGCTACCCATCACTTTCTCTAAAGAA GGGTGAGTTGTGTCATGTAATAAGATGTTGAAAAAACATATTTGGTTAGTTTTCAATTTTCAATCCTACTATATACTTTCATTACCATTTTTTATGTTGA AGAGGAAGACATTTTTTCAATGAAGGACGGATACGGATGCATGTGTCGGATACGATAGTATTCGATACATGGACATACATTTTTTTGTATGGTGTATATC AATGAAGGACGGATACGGATGCATGTGTCGGATACGATAGTATTCGATACATGGACATACATTTTTTTGAAAATATAGGATACAATAGGGATGTGTGTAT CTTTGTTTTATGTAATATGTTGCTTGTCACTTGAAGAAGTACTAGACTAAAGTAGATAACTTTCAAACTTGTTCCATGTCTAACTTCAGTATGTAAAGTT AAAAATATGTATCAGTGCATTTGCAACTGTTAAATAGATAGTGTGGTTCCTAGTTCCTACCCATTTGGGCATGAGGTGTGAGTACTCCATTTCAAACGTG ATATGAACATTTTGAGATAATTTTCATGTGAAATGAGTGACGGTTCCTTTTCATAATCAGCACTGCAGGCACTAGCACAACTCCGGTGTCAACTACACCA ACCATCGGGACCAACCCGACCAGAACTCCATCAACAACCACTGGCTCCACAAGCAGCACTGGTACTACTCCATATGGCACCACCCCTGGTGTATTAGGAG GAATTGGCACTGGTATGGGGCCTTCAGGATCCGGCATGAACAATGATGAAAGTCATGGTGGGCTTAAACTTGTTGAAACTAGTTTGTTCTCTACATTTTC AATTGCCCTGTTTTTTGGCTTGATCATGCTTTGGTGGGGCTGAAAGGTTAAGTTGGTCAAGACTGTGACCTGTGTATTTATGCTGTAATGTCACATGTTA TTGTTATTTTCTAGGTGTTGAACTTGAGACATTAGCTTTTTCTTTTTACTATTTTTCTCCACCCTGTGCCTTCTCTTGGGTAAAAAGATAGGCTTTTGAT TCTTTCCATGTAGTGCTTATGCTGTTTCTATGAGACTCTTCTGTCTTATCCTCTATCTGTATATCAATTGGTTAGTAGTTTTTTGATTTGATGAAAAAAT AGCTTCTATTTTTCC BLAST |
Tissue | pods |
Gene name | LI_gene_154849; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_375388
Blastp | PLASMODESMATA CALLOSE-BINDING PROTEIN 3 from Arabidopsis with 65.14% of identity |
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Blastx | PLASMODESMATA CALLOSE-BINDING PROTEIN 3 from Arabidopsis with 72.15% of identity |
Eggnog | X8 domain containing protein, expressed(ENOG410YNCG) |
Kegg | Link to kegg annotations (AT1G18650) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019438871.1) |
Pfam | X8 domain (PF07983.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |