Ll_transcript_376531

• Id Trinity: TRINITY_DN47720_c1_g1_i15
• Name Transcript: Ll_transcript_376531
• Sequence: AGATTATGTGGTTGGCTCTGTAAGTCATAATTGAATATCAGCTCCAAACCACTTTGAATTTGCAACCAGATGAAGGAAATACAAGAACAAAAGAGAGCAG ATTGTTGGAAAATCAAGCTAAGTTGGTAATGAGTGTGTTAAGGTTACATCGCAAAACCAACTGGTATTAAGTGATGAGGTAAACAATGAGACTTATTTGT GTATTAAGCAAGCGATCACCATAAAAGTGAAGAGTAATGATATTATATTATTAAGCTAAAAGAAGTGTAGGGATATCAAATTTGTAAGTAAAAAGAGTCA TAAACTGAATGAGTTAAAATTTAGGACATAAGTGTGTATAAAATTCATACAGGAAAAATACTAACCTCCACAAAACAATCATGGAAAAGCAAGCGAAGGA GCTTTGCAGGAATGGAAGGATCCTGGAAAGAGGATGAAGTGACCGTGTTTCTTACAATTAACTCTGCTGCTGGGCATGAAGCTTCATAGAAGTTGTAAAC AAGGCTACCTGAAACAGAAGCAGCAAAAAAGAAAACAAAAACTAGTGCTCTAATTGTGTCCATAGAACTAAATTCTTTAGTTGTGTATGTAGAGAGCACA GAGTATCTGGTATGACTTGAAAATGAATGAAATGATGATGAGACAGATATAGCAAAGGTGACAAGGAAATTGACCTATTTAAAGCTATGCATTAAATGTG GTTGGTTGAGTGAGGTCAGTGATACATTGCCTCTCTCTAATCTCTATCTATCATTTGTTTCTGACTTGCATGCACTGTAAGTAACAGGATTGTTTCATCA CAGATGTAAACAAAAATCTCTCTACTGAGTAAAGGTGCTGGAATTATCAACAACATTTCTTGTACTTTGTTTTATTTACTGCCATTCCAACCATAAACAA ACCTCCTTCATAAGAATATACATGATTTTATATGAGTGATTTCACAACCTTAAAAGCTGTTATAGTACTAGTGTCTTTGCTACTTTGAAATAGGTGGTTC TTCCAACCACTTTGCACCAAACCCTGTTCCTTCACAATCAGAGCTGTTATAGCACATTGAATGCTGCCAGAATTGAACCTCCATTTGAATTTCCAAGTTC AAGGTCAACTTGGAAGATGGTTATTGCAAATAGCATATGGTCAAGTGTGATTTCAGATTACTTTTGGTAAGTTGATCTAACAGGACAGCTTGGATGATTT ACATAGTATGAGTAATTGAGTAGAATAATGTAACAGGGCCATATCAAAGGAAGAAACTATGTATGTGATTTCAGATTACTTTTTGTATATTAAAGGAGGA AGAAACTATGTATGTGAATTGGTGAGGGAAAAGCATAAGTGTTTAAATAAAGTGTTGTGGTTTAACTTTGTGTATACACAATTCTTTAGGATATAACAGA TTTGATTTTGGTTGAAGAATGGTATGGTATGAAATCATAATATGTAAATGCTGCTGACATTACAAAAAGAAGAATAAAAACAGGGAAAAGAGAGTTAGTT CCTTCTCTTTCTATAAATTCATCATTGCATCATGTAATTTTAATAACAAGAATTACAAGTATATTAAGTTATAAAATTTGATGGAAGAGTATAAAGAAAG AGAGATGAAATTATGATGAGGTAAAATGGGAAATGGAAAATTGAAATAAAATAAGTTAACTAAAAAATAATCCAATTTATCTTTTTCAGTGTATAATTTG ATTTGGGCTGTGAATGAAGTCCATGAACGTTGTTAATGTGAAGGGCCCAGAGTTGAAGTAATATATTAGAGATATAAAGTGGGGTGGGAGTAAGAATTAG GGATCTGGAATGGAGAAAGGAAAGGGAGTGATGGTTGGATCTGTGGGACGACGATGGGGAATTGATTTGTCTGATAATTCTACTTCTCCTTCTTCTCGTG ATTTCCTCGATCCTCCTGGTTTCTCACGCGCTTCTCTCGATCACGATGATTCCTCTCTCACTCGCCCTACCAAGGACGCTGAATCCACATGGAAGTCGCA GAAAGCATGGGAAGTCGCACAAGCTCCATTCAAGAACTTGTTAATGATGGGATTCATGATGTGGATGGCTGGTTCCACTGTCCACTTGTTCAGCATCGGT ATCACCTTCTCTGCTCTCTGGCAACCCATCTCCGCTTTACAATCTCTCGGAAAGAGTAACAACCTCAACCTATTCAATCTATTCAATTCCTTCTTAAATT TCTTATTTATTCCTTCTTCTTCTTCTTCTTTCAGTTTTTGAGCCTTACAAAGACACTAAGGTCGAACTTCTCGGACCCAAGTTGTTATTCATAGCCCTCA ATTTGGGTGGCTTGGCACTTGGTGTTTGGAAGGTAACAACATTTCTCCTATCCTATTATGCTTTCATAATTCATATCTATGTCTCCTCTTCTGCAGCTTA ACGCTATGGGCCTTCTTCCTACTCACACCTCAGACTGGGTCTCATCCTTGCCACCTGCTCTGGAGGTGGAGTATTCAGGTGGGG
• Tissue: pods
• Gene name: LI_gene_154885;
• Additional information: details;

Expression of Ll_transcript_376531

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0.6
• PS2: 0.1
• PS3: 0.1
• PW1: 0
• PW2: 1.1
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_376531

• Blastp: ER membrane protein complex subunit 4 from Danio with 32.38% of identity
• Blastx: Peroxidase 18 from Arabidopsis with 70.45% of identity
• Eggnog: ER membrane protein complex subunit 4(ENOG41118KQ)
• Kegg: Link to kegg annotations (402956)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_016162825.1)
• Pfam: Protein of unknown function (DUF1077) (PF06417.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;