| Id Trinity | TRINITY_DN47720_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_376516 |
| Sequence | AGATTATGTGGTTGGCTCTGTAAGTCATAATTGAATATCAGCTCCAAACCACTTTGAATTTGCAACCAGATGAAGGAAATACAAGAACAAAAGAGAGCAG ATTGTTGGAAAATCAAGCTAAGTTGGTAATGAGTGTGTTAAGGTTACATCGCAAAACCAACTGGTATTAAGTGATGAGGTAAACAATGAGACTTATTTGT GTATTAAGCAAGCGATCACCATAAAAGTGAAGAGTAATGATATTATATTATTAAGCTAAAAGAAGTGTAGGGATATCAAATTTGTAAGTAAAAAGAGTCA TAAACTGAATGAGTTAAAATTTAGGACATAAGTGTGTATAAAATTCATACAGGAAAAATACTAACCTCCACAAAACAATCATGGAAAAGCAAGCGAAGGA GCTTTGCAGGAATGGAAGGATCCTGGAAAGAGGATGAAGTGACCGTGTTTCTTACAATTAACTCTGCTGCTGGGCATGAAGCTTCATAGAAGTTGTAAAC AAGGCTACCTGAAACAGAAGCAGCAAAAAAGAAAACAAAAACTAGTGCTCTAATTGTGTCCATAGAACTAAATTCTTTAGTTGTGTATGTAGAGAGCACA GAGTATCTGGTATGACTTGAAAATGAATGAAATGATGATGAGACAGATATAGCAAAGGTGACAAGGAAATTGACCTATTTAAAGCTATGCATTAAATGTG GTTGGTTGAGTGAGGTCAGTGATACATTGCCTCTCTCTAATCTCTATCTATCATTTGTTTCTGACTTGCATGCACTGTAAGTAACAGGATTGTTTCATCA CAGATGTAAACAAAAATCTCTCTACTGAGTAAAGGTGCTGGAATTATCAACAACATTTCTTGTACTTTGTTTTATTTACTGCCATTCCAACCATAAACAA ACCTCCTTCATAAGAATATACATGATTTTATATGAGTGATTTCACAACCTTAAAAGCTGTTATAGTACTAGTGTCTTTGCTACTTTGAAATAGGTGGTTC TTCCAACCACTTTGCACCAAACCCTGTTCCTTCACAATCAGAGCTGTTATAGCACATTGAATGCTGCCAGAATTGAACCTCCATTTGAATTTCCAAGTTC AAGGTCAACTTGGAAGATGGTTATTGCAAATAGCATATGGTCAAGTGTGATTTCAGATTACTTTTGGTAAGTTGATCTAACAGGACAGCTTGGATGATTT ACATAGTATGAGTAATTGAGTAGAATAATGTAACAGGGCCATATCAAAGGAAGAAACTATGTATGTGATTTCAGATTACTTTTTGTATATTAAAGGAGGA AGAAACTATGTATGTGAATTGGTGAGGGAAAAGCATAAGTGTTTAAATAAAGTGTTGTGGTTTAACTTTGTGTATACACAATTCTTTAGGATATAACAGA TTTGATTTTGGTTGAAGAATGGTATGGTATGAAATCATAATATGTAAATGCTGCTGACATTACAAAAAGAAGAATAAAAACAGGGAAAAGAGAGTTAGTT CCTTCTCTTTCTATAAATTCATCATTGCATCATGTAATTTTAATAACAAGAATTACAAGTATATTAAGTTATAAAATTTGATGGAAGAGTATAAAGAAAG AGAGATGAAATTATGATGAGGTAAAATGGGAAATGGAAAATTGAAATAAAATAAGTTAACTAAAAAATAATCCAATTTATCTTTTTCAGTGTATAATTTG ATTTGGGCTGTGAATGAAGTCCATGAACGTTGTTAATGTGAAGGGCCCAGAGTTGAAGTAATATATTAGAGATATAAAGTGGGGTGGGAGTAAGAATTAG GGATCTGGAATGGAGAAAGGAAAGGGAGTGATGGTTGGATCTGTGGGACGACGATGGGGAATTGATTTGTCTGATAATTCTACTTCTCCTTCTTCTCGTG ATTTCCTCGATCCTCCTGGTTTCTCACGCGCTTCTCTCGATCACGATGATTCCTCTCTCACTCGCCCTACCAAGGACGCTGAATCCACATGGAAGTCGCA GAAAGCATGGGAAGTCGCACAAGCTCCATTCAAGAACTTGTTAATGATGGGATTCATGATGTGGATGGCTGGTTCCACTGTCCACTTGTTCAGCATCGGT ATCACCTTCTCTGCTCTCTGGCAACCCATCTCCGCTTTACAATCTCTCGGAAAGATTTTTGAGCCTTACAAAGACACTAAGGTCGAACTTCTCGGACCCA AGTTGTTATTCATAGCCCTCAATTTGGGTGGCTTGGCACTTGGTGTTTGGAAGCTTAACGCTATGGGCCTTCTTCCTACTCACACCTCAGACTGGGTCTC ATCCTTGCCACCTGCTCTGGAGGTGGAGTATTCAGGTGGGGGTATAAACTTGGGTTGATGTGCCACTTGGAATGAACTTGATTGAACAAAGAAGGATGAG TTGAGTTTGGAATGCATGAGATATGGTTTATTTCTAATGGTTACTTTGGACTGCATCAACTATCATGGTTTATTTCTAATGGTTACTTTGGACTGCATCA ACTATCATGGTTTATTTCTAATGGTTACT BLAST |
| Tissue | pods |
| Gene name | LI_gene_154885; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_376516
| Blastp | ER membrane protein complex subunit 4 from Danio with 33.92% of identity |
|---|---|
| Blastx | ER membrane protein complex subunit 4 from Danio with 33.92% of identity |
| Eggnog | ER membrane protein complex subunit 4(ENOG41118KQ) |
| Kegg | Link to kegg annotations (402956) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_016162825.1) |
| Pfam | Protein of unknown function (DUF1077) (PF06417.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |