| Id Trinity | TRINITY_DN47725_c0_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_374813 |
| Sequence | GCATGATTTCGCCTTTGTTGAATTTAGTGATCCTCGAGATGCTGATGATGCAAGATATCACTTGGATGGTCGTGATTTTGATGGAAGTCGTCTTATTGTT GAGTTCGCAAAAGGGGTTCCTCGTGGTTCCCAGGCGCCTCGTGGTTCCCGGGAATATTTGGGGCGAGGTCCTGCTCCTGGATCTGGGCGCTGCTTTAACT GTGGCCTTGACGGCCACTGGGCCCGAGATTGCAAAGCTGGGGATTGGAAGAACAAGTGTTATCGCTGCGGGGAGAGAGGTCACATAGAAAAGAACTGCAA GAATAGTCCCAAAAAGTTGAGACGTGAAAGGAGTTATTCACGCTCACCAGTCAGGGGACGTTCTCCTCGTCGTGGCAGAAGCAGGGAGCGAAGCTACAGC CGAGACCGCAGCTACAGCCGATCAAGATCCCCTGTCCGTGAGCGCAGTCCTGTTCGTAAAGATAGATCAGAGAGTCCTCGCTACAGAAGCCCTGAACCCA AAAGTAGCCCTCTGCCCTCCAATGCAAGGAAGCATAGTCCATCACCTGACCGAGGTAGCCCACAGAAGAGCGGTGATATTTCTCCTGGTAATGATAGGTT GGCCATACAGCAAGACGGGTCTGACTACAGCGATGGTCCTAGAGAGAAGAGTGGAAGCCCTGCTAGCCCTGCAAGGGACCATGAAGATGACAGTCCTAGA GCTAATGGTGCTAGCCGTAGCCCTAGCCGCAGTCCCAGGGATGAGAGGAGCCCCATTGACAATGATGATGACAACCACCGCGGTTCCCCTAGAGGCAGTG AGTCACCTTAAGAAGTTTCTGATAAATGAACACAGGATGTGGGATTTATATGCTTTGTTTATTAAATGCACTTTATTTTGAACTGTATGTGACAATTATT CACCCAAAAAAGAAACTCAATTTATGCTAAGTTTATGGTTGTTATGAAGAACGGTTTTATTAATAGTATATTTCAGATTCTTCATGGATTTTTAGTTATC TATTATCATTGTCAGATTTTTAAATCTTTCAAAATTTGAATTTTAACTTGATATAGTTATGTTGAAGAACCGTTAAGTCAAGTTTTGAGTGAACATGTGT GCTTGTTGAAACCATGTAAATGCAAATCTGCTGAACTCCTTTATCACAATGATTTTATTGAGTAAATAATTTATTGCAACC BLAST |
| Tissue | pods |
| Gene name | LI_gene_154932; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_374813
| Blastp | Serine/arginine-rich splicing factor RS2Z32 from Arabidopsis with 55.51% of identity |
|---|---|
| Blastx | Serine/arginine-rich splicing factor RS2Z33 from Arabidopsis with 78.5% of identity |
| Eggnog | serine arginine-rich splicing factor(ENOG4111N8Y) |
| Kegg | Link to kegg annotations (AT3G53500) |
| CantataDB | Link to cantataDB annotations (CNT0001557) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456367.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |